Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00911 ATGGCGCGAGTGAACTTGGACGGAAACCCGATCTCGATGCAGGCGATATGCATGATCGGCGGCGGCGGCTTCATCGGATCGCACCTCTGCGAGAAGCTGATGGCGGAAACCAACCACAAGGCCGTCGTCGTCGACGTCTCCTCCGACAAAATCAACCACCTCCTGGACATGTCCCTCCCCTGGGCGCACCGCATCGAGTTCCACCAAATGAACATCAAGACCGATTCTCGCCTCGAAACTCTCATCAAAGCCTCCGATCTCACGATCAATCTTGCTGCAATTTGCACGCCGGCGGATTACAACACGCGCCCGTTGGACACCATCTTTAGTAACTTCATTGATGCGATTCCGGTGATTAAATATTGCACCGAGAACAAGAAGCGTTTAATCCATTTTTCTACGTGCGAGGTTTACGGGAAGACTATAGGTAGCTTTCTCCCAGAGGAATATCGAAAGGACCCAAAATATTTCATGCTCAAAGAAGATGTTAGTCCTTGTATTTTTGGTCCGGTTGAGAAACAGAGATGGTCTTATGCTTGTGCAAAGCAAATGACTGACAGGCTAATATATGCTGAGCACGCGGAGAATGGCCTCAAATACACCATTGTGAGACCATATAACTGGATTGGCCCAAGAATGGACTTCATTCCTGGTGTGGATGGCCCAAGTGATGGTGTTCCCAGAGTCTTAGCTTGCTTCAGTAATAGTCTCCTGCGCGGCGAGCCCCTCAAACTTGTTGATGGTGGGGAATCAAAGAGAACCTTTCTCTACATCAAAGATGCAATTGATGCTGTTGTGTTAATGATTGACAACCCTGAGAGAGCAAATGGGTACATCTTTAATGTGGGAAACCCAGACAATGAAGTATCTGTGAAGCAACTAGCTGAGCTTATGATGAAGGCTTATTCAAAGGTGGCTAGTGTACCTGCCTCTAGTCTATCAACTCTGAAAGTGAGTTCAGAGGATTTCTATGGTAAAGGTTATGATGACAGTGATAGGCGCATCCCTGACATGACAATTATCACCAGGCAGCTTGCTTGGAAGCCAAAGACACCTCTTGATGAACTGTTGGATGTTACCCTCCAATATCAACACCAGACATATTCTCGTTCTATCCAGAGAGAACTTTCAAAACCTTCAAATTGA 1146 0.4695 MARVNLDGNPISMQAICMIGGGGFIGSHLCEKLMAETNHKAVVVDVSSDKINHLLDMSLPWAHRIEFHQMNIKTDSRLETLIKASDLTINLAAICTPADYNTRPLDTIFSNFIDAIPVIKYCTENKKRLIHFSTCEVYGKTIGSFLPEEYRKDPKYFMLKEDVSPCIFGPVEKQRWSYACAKQMTDRLIYAEHAENGLKYTIVRPYNWIGPRMDFIPGVDGPSDGVPRVLACFSNSLLRGEPLKLVDGGESKRTFLYIKDAIDAVVLMIDNPERANGYIFNVGNPDNEVSVKQLAELMMKAYSKVASVPASSLSTLKVSSEDFYGKGYDDSDRRIPDMTIITRQLAWKPKTPLDELLDVTLQYQHQTYSRSIQRELSKPSN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00911 381 Pfam NAD dependent epimerase/dehydratase family 16 283 IPR001509 -
Cca04g00911 381 Gene3D - 14 373 - -
Cca04g00911 381 PANTHER BIFUNCTIONAL POLYMYXIN RESISTANCE PROTEIN ARNA 1 381 - -
Cca04g00911 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 16 366 IPR036291 -
Cca04g00911 381 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00911 Cca-Chr4 9682363 9685359 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00911 K12449 - gmx:100790039 720.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00911 04 9682363 9685359 Cca04g00911 04 9682363 9685359 ECH