Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00898 ATGGGGTTCGTGGCGAGTTCCTTCTGCTCCCTCTACAAATTCCCATCTTCTTCTAATGGGCCCACACCCAAGGCCAAGTTCCGAGCTCCCACAACGTCCTGTTTGGGCCACCACGACCCAATCTGCAACAAAAGAACCTTTCTTTTAACCACCATCGCCCTTCTTCCATTTCGCCGCTTAAAGAGGGCTCCAGCTCTTGAACCTCCACCCTCAAAAGTAACTGAGGTGAAGACACGAGAGGATGATCAGGAAGCCGAGACAGCACCTGAAGTGGACAAACCATCAAATTCCCCTCTGCCTCTCCTGAATGGAATTGGAATATTTTCTTCTGGTGTGTTGGGTGCTCTCTATACACTTGCTCAGAAAGAAAAGGCCTCTGCTATTGCAACGATCGAAACAATGAGCATTAAACTGAAGGAAAAAGAAGAATTGATTGTTTCCTTGAAGAAGAACTATGAGTTTAAGTTACTGAACAAGCAGGAGGAACAAGCCAAGCTACTTGAAAAGGCAAAGGAAGAGCAACAGGCATTGATAAATGAACTAAATTCTGCAAAAAGTACTATCAACCGCTTGGAACAGGAGCTTAAAAACGAGAGAAATTTGATTGAGGACCTGAAACTTCAAATTGACAGACTTGAAACTGAGCTTTCAAAGACTGATACAGATAAGAAGGATCTTGAAAACAATTTGAAAGAAAAGATAGATTCCATTGGAATTTTAGAGGAAAGAATCAGTCAGTTGAGTGTGATCCTCAAGGACAAAGAAGATTTAGTTCAGAATCTCAATTCATCCCTCGCAAAAAAGGAGTTGGAATTGAAGAGTTTGAATTCTACCTATATGCAAACCAAGGATGACTTATCCAATGTTCGGTTGCAGATTCAAGGGTTGAAAGAGGAAATACTGAAAAGCCAAGAGGAACTAAAAACAAAAGATTCCCAGGTTATAGAACTAAATTCAAGAGTGAGTTCCTTAACTCTTGAGAACAATGATTTTAGGAGTAAATATGATGCCATGGAGAAGGAATACAATGACCTGAAGGTCACTGCTGAAAAGAAGGCTGCTTTGGACTCTAAGGTTTTAAGAGAAAAAGAAGAGGAGTTTCATCAGCTAAAGGATCAGTTTGAACTTGCCCTAAGTGAAGCAAGCAAAAACCAGATCACCATTGCTAATTTATCTCAAGAAAGAGATGATTTGAAGGAAGCTCTAGAGAATGAAtctggcaaagtgaatcacttgaagtatgaactcctagtcactcaagagaatcttgaaaaatcaagagatgggtctacTGAATTGGAAAACCTTCTAAATGAGTCAAACAAACTGCGCAAAGAGCTTGAACTTGAGGTCTCTAAGCTTTCATCTGAGTTCACTGAAGTTAAAGTATCTCTACAGAGAAGCCTTGATGATGCAAAACATGAGGCAGAAATGCTAGCAAATGATCTTACAACTGCAAAGGAACAATTGAAGAAAGCACAAGCAGAGTTCCAAAGTAAGTCCCAAGAACTGACAGCTGCTCTTGAAAAGTGTGATAGCCTACAAAAAGAATTAATTGACGTTTACAAAAAGGCTGAAACCACAGCAGAGGATTTGAAGAAAGAAAAACAGTTAGTTGCTTCTTTGAACAAAGATTTACAAGCTTTGGAGAAGCAAGTCTCAGTAGACAAGGACTCCAGAAAATCTCTTGAGATGGACCTGGAGGAGGCTACCAAATCACTAGACGAAATGAATGGAAACGCGCTGATCCTTGCTGATGAACTAGGGAGAGCTAATTCTCTTATTTCTAGCCTTGAAAAAGAGAAAGAGGTGCTTTCTAAGTCCCTAATAGACCAAAGAAATGCAAACAAAAAGGCCCAGGACAACATTGAAGATGCTCATAACCTCATCATGAAACTTGGCAAAGAAAGAGAGAATTTAGAAAATAAAGGGAAGAGATTGGAGGAGGAATTGGCTTCTGCCAAGGGTGAAATATTGCGCTTGAAGAGTCGAATCAGTTCTTCAAAAGTTGTGGTTAACAATGAGCAAGTGCAGAAAGATGAAGGTCTAAACAAGGTCAATTCTTCAAACGTTGCTGATAACAATAAGCAAGTGCAGAAAGATGAAGGTGTAAACAAGGCCAATTCTTCAAAAGTTGGTGCTAACAATGAGCAAGTGCAGAAAGATGAAGGTGAAAACAAGGTCACTGTAAATGCACGGAGGACTGTCAGAAGAAAAAAGGCTAATCCGCAATAA 2235 0.3879 MGFVASSFCSLYKFPSSSNGPTPKAKFRAPTTSCLGHHDPICNKRTFLLTTIALLPFRRLKRAPALEPPPSKVTEVKTREDDQEAETAPEVDKPSNSPLPLLNGIGIFSSGVLGALYTLAQKEKASAIATIETMSIKLKEKEELIVSLKKNYEFKLLNKQEEQAKLLEKAKEEQQALINELNSAKSTINRLEQELKNERNLIEDLKLQIDRLETELSKTDTDKKDLENNLKEKIDSIGILEERISQLSVILKDKEDLVQNLNSSLAKKELELKSLNSTYMQTKDDLSNVRLQIQGLKEEILKSQEELKTKDSQVIELNSRVSSLTLENNDFRSKYDAMEKEYNDLKVTAEKKAALDSKVLREKEEEFHQLKDQFELALSEASKNQITIANLSQERDDLKEALENESGKVNHLKYELLVTQENLEKSRDGSTELENLLNESNKLRKELELEVSKLSSEFTEVKVSLQRSLDDAKHEAEMLANDLTTAKEQLKKAQAEFQSKSQELTAALEKCDSLQKELIDVYKKAETTAEDLKKEKQLVASLNKDLQALEKQVSVDKDSRKSLEMDLEEATKSLDEMNGNALILADELGRANSLISSLEKEKEVLSKSLIDQRNANKKAQDNIEDAHNLIMKLGKERENLENKGKRLEEELASAKGEILRLKSRISSSKVVVNNEQVQKDEGLNKVNSSNVADNNKQVQKDEGVNKANSSKVGANNEQVQKDEGENKVTVNARRTVRRKKANPQ 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00898 744 Coils Coil 560 580 - -
Cca04g00898 744 PANTHER - 12 684 - -
Cca04g00898 744 SUPERFAMILY Tropomyosin 444 669 - -
Cca04g00898 744 Coils Coil 595 664 - -
Cca04g00898 744 Coils Coil 360 415 - -
Cca04g00898 744 Coils Coil 430 457 - -
Cca04g00898 744 Coils Coil 251 313 - -
Cca04g00898 744 Coils Coil 321 348 - -
Cca04g00898 744 MobiDBLite consensus disorder prediction 681 717 - -
Cca04g00898 744 Coils Coil 156 243 - -
Cca04g00898 744 Coils Coil 131 151 - -
Cca04g00898 744 MobiDBLite consensus disorder prediction 718 732 - -
Cca04g00898 744 MobiDBLite consensus disorder prediction 681 744 - -
Cca04g00898 744 Gene3D - 202 384 - -
Cca04g00898 744 Coils Coil 462 552 - -
Cca04g00898 744 MobiDBLite consensus disorder prediction 73 89 - -
Cca04g00898 744 MobiDBLite consensus disorder prediction 65 96 - -
Cca04g00898 744 PANTHER BNAA03G46100D PROTEIN 12 684 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00898 - - gmx:100791634 1007.28