Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00867 ATGGTTTCAATTTGGAGGTTGAAGAAGTTGTGCTTTGTGGAGCCTGTGAAGTCCCCCTCCTTTGGTTTTGAATCCATTGAAGTGGAAAGAAAGGTGCAAAAGAGGCAGTGTAAGGAGTGGAGGTGCATTGATTATTGGTGTTGGGTGATAGGGTACATGTGCACCACTTGGTGGTTTCTCTCTTTGTTGTATGGTTCCTTGCCAGCCACATTGCTTGGCTTTGAGGCACCACTGTCACCTGGGGTGAGGTTAAGCCGTGAGGGAGTTACTGCACTTCACCCAGTTGTTCTTGTACCTGGCATTGTGACTGGTGGGTTGGAGCTTTGGGAAGGAAGGTCTTGTGCTGAAGGCCTTTTCAGAAGACGGTTGTGGGGTGATGGTTTTGCTCAAATCATCAAAAGGCCCTTGTGTTGGTTAGAGCATCTCTCTTTGCATGATGAAACTGGGATGGACCCGCCAGGCATTAGAGTCAGGGCAGTGCCTGGGTTTGTTGCTGCTGAAAATTTTGCTTCTGGTTATCTTGTTTGGTCTGATTTGGTAGAAAATTTGGCAAAAATTGGTTATGAAGGGAAGAACTTGTACATGGCTGCCTATGACTGGAGACTTTCCTTCCAGAATACTGAGATTCGGGACCAAGCTCTTAGTAGATTGAAGAGTAGTATTGAGCTTATGTTTGTCACAAATGGCTATAAGAAAGTGGTAGTGGTACCACAATCTATGGGGGCTATTTATTTCCTCCATTTTCTAAAATGGGTTGAGACACCTCCTCCCATGGGAGGTGGTGGTGGTCAGGGTTGGTGTGACAGGTACATCAAAGCAATCATGAATATTAGCCCTGCATTTCTTGGTGTTCCTAAGGCAGTTAGCAATATATTTTCAACTGAAGGCAGTTTTGCATTTGTCAGAGCTGTGGCTTCTGGCATTTTAAATTTGGATTACCTTGGTCGTCAAACACTTGAGCATGTAATGCGGGTGTTTAGAACTTGGGATTCAATCATCTCATTGCTTCCAAAAGGTGGTGAAACCATCTGGGGTGACTTGGATTGGTGTCCTGAAGAATGGAATAACTGTGATCAGCAGGAAATTTCATGGGGATGTGATTCTGCTAACTTTAACTTATCATGTGAGGCTGTGTGGACTGGTTATGATGAGATGAGCAGAGAAAGCATCCAAAAAGTTGCTAAGAAAAAGGCTTATACTGCAAAAACAGTTTTTGATCTGCTTAACTTTGTGGCTCCAAAAATGATGAAGCGTGCTGAGGCTCATTTTTCTCACGGGATAGCAGACAACTTAGATGATCCTAAGTATTGTCATTACAAATACTGGTCTAATCCACTTGAGACCAAACTACCTGATGCTCCGGATATGGAAATATACTGTCTATATGCTGTGGGAATTCCCACTGAAAGATCACATGTACACAATTTGTCCCCTTCTCACAAGTACAATAGTCTTCCTATCCAAACTGATGCTTCATCAGATGGAGAAGAAGAAAGTTTGTTACAAAATTCTGTGGATGGTGATGAGAGTGTGCCTATTGTAAGCTCAGGGTTCATGTGTGCCAAAGGATGGCGCAGGCAAACCCGGTTCAATCCATCTGGCATGGCTACATACACAAGAGAGTATCCGCTCAAACAACCAGGCAGTCTTGTTGATAGAAGCCTAGAGACTGGAGCAAGTTCCAACATTATGCTAAATGTTGCCTTAATTGAAGATGTTTTACTAGTTGCTGCTGGAGCCACAGGAGAGGATATTGGAGGAGATTTGATATTTTCAGATATAATGAATATGTCTCAGAGGATAAATCTCAGACTATGA 1818 0.4329 MVSIWRLKKLCFVEPVKSPSFGFESIEVERKVQKRQCKEWRCIDYWCWVIGYMCTTWWFLSLLYGSLPATLLGFEAPLSPGVRLSREGVTALHPVVLVPGIVTGGLELWEGRSCAEGLFRRRLWGDGFAQIIKRPLCWLEHLSLHDETGMDPPGIRVRAVPGFVAAENFASGYLVWSDLVENLAKIGYEGKNLYMAAYDWRLSFQNTEIRDQALSRLKSSIELMFVTNGYKKVVVVPQSMGAIYFLHFLKWVETPPPMGGGGGQGWCDRYIKAIMNISPAFLGVPKAVSNIFSTEGSFAFVRAVASGILNLDYLGRQTLEHVMRVFRTWDSIISLLPKGGETIWGDLDWCPEEWNNCDQQEISWGCDSANFNLSCEAVWTGYDEMSRESIQKVAKKKAYTAKTVFDLLNFVAPKMMKRAEAHFSHGIADNLDDPKYCHYKYWSNPLETKLPDAPDMEIYCLYAVGIPTERSHVHNLSPSHKYNSLPIQTDASSDGEEESLLQNSVDGDESVPIVSSGFMCAKGWRRQTRFNPSGMATYTREYPLKQPGSLVDRSLETGASSNIMLNVALIEDVLLVAAGATGEDIGGDLIFSDIMNMSQRINLRL 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00867 605 MobiDBLite consensus disorder prediction 484 506 - -
Cca04g00867 605 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 369 605 - -
Cca04g00867 605 PANTHER PHOSPHOLIPID:DIACYLGLYCEROL ACYLTRANSFERASE 2-RELATED 29 362 - -
Cca04g00867 605 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 369 605 - -
Cca04g00867 605 PANTHER LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED 29 362 - -
Cca04g00867 605 SUPERFAMILY alpha/beta-Hydrolases 91 474 IPR029058 -
Cca04g00867 605 Gene3D alpha/beta hydrolase 142 315 IPR029058 -
Cca04g00867 605 Pfam Lecithin:cholesterol acyltransferase 119 531 IPR003386 GO:0006629|GO:0008374
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00867 Cca-Chr4 9055450 9059718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00867 1 605 Acyl Lipid Metabolism Gene Families AT3G44830 53.037 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00867 K00679 - gmx:100806313 1012.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00867 04 9055450 9059718 Cca04g00867 04 9055450 9059718 ECH