Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00852 ATGGCACTCCCATACTCCATCTTTTCCTCAGCAGCAACCACACTCACTCTTTCATCCCCAATAACCAAACCCCACAAACCCAATCTCCTTCCCCTTTTCTCCTTCCCCAACAACTCACCCATAAGCAGAAGAAGAAACCTTTCCCTAACCCCTGCACGCGTTGCTGCACCACCCTCAACAATTGAAGCCGATCAATCATCCCCAGAAACCGAGGAAGAGTTTAACGATGATAGCTCTTCCTCTAAGTTCTCTTGGAGGGATCACTGGTACCCTGTTTCGTTAATTGAAGATCTCAACCCTCTCTTGCCCACGCCGTTCCAGCTTCTCGGTCGTGAAATCGTGCTTTGGTACGACAAGTCCATTGCCCAATGGGTTGCTTTTGATGATAAATGCCCCCACCGTTTTGCTCCTTTATCTGTGAGTATAATTCTCTCTGTTTTTCTTCTTCCTTTTTGTCACTATTAG 465 0.4688 MALPYSIFSSAATTLTLSSPITKPHKPNLLPLFSFPNNSPISRRRNLSLTPARVAAPPSTIEADQSSPETEEEFNDDSSSSKFSWRDHWYPVSLIEDLNPLLPTPFQLLGREIVLWYDKSIAQWVAFDDKCPHRFAPLSVSIILSVFLLPFCHY 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00852 154 MobiDBLite consensus disorder prediction 50 82 - -
Cca04g00852 154 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 89 154 IPR017941 GO:0051537
Cca04g00852 154 SUPERFAMILY ISP domain 82 143 IPR036922 GO:0051537
Cca04g00852 154 Pfam Rieske [2Fe-2S] domain 88 139 IPR017941 GO:0051537
Cca04g00852 154 Gene3D - 84 145 IPR036922 GO:0051537
Cca04g00852 154 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 26 139 - -
Cca04g00852 154 PANTHER PHEOPHORBIDE A OXYGENASE, CHLOROPLASTIC 26 139 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00852 K13071 - gmx:100812162 208.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00852 04 8885989 8886453 Cca04g00852 04 8885989 8886453 ECH