Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00841 ATGGCGAAGAAATCCATCGGAAGCTTAATGCGGAAGAAGCTTTCTGATATCACCAACAGCACCATCCCTCACTCCCAACAACTTGACACGTTTCCTTCCGAGAACAATTCCATTCAACAACTCCTGAAGGAAAGGACGGCGTTGATCCAACTGCTTGCGGAAAGAAATAAGATTATTGAAGTGAGTGGCGCGGCGCTGCAGAGGCTGAGAGGCGATGTGAAGAAGCTGCAGCTTCAAAACTGGAACCTCGCTCAGTCAAATAGCCACCCAGGCGCTTCGGCAACATCAGATGAGACTCAACCCCGAGAAATGTGTGTTTGGAGTTTCGGGCGGCAAGTTCTTAAGGGCTTCCAAAATTTATTGGAGATTGACCACGAAAAGAATCCACCATTATCACAGTTACAGGAAGGAGATGAAAAAGCAGGGCAGCCAACCCCTAAAGCTAGCAACGATGAACAACATAAGAATATGAATAGGAGACGCATGAGAAGTAAATCTACTGGTTCTTCTACTGCTTCCAAGAATACAAGCAAAGACAAAGTTAAAGACAATAGGAGACGTCTGAGGAGACATTCTACAACGTTCAAAACCCATGAACATGAACCTCTAGAAAATTTGTTCGAGTTAGAGGATGCTACATATCTTATCACACAATCTGGACCTAACAAACTGAGATCTCCAACTTCGAAAACTGAAAGAGGAGAAAATACTGTTTTAAGGAGGGAAGCTCCAAGGTGTTCTTTCGGAAGACCCTTGCGAAGAGCAGTTCAGAAGGTTCAATCTTACAAGGAGATTCCTCTAAATGTCAAGATGCGAAGACTAGCATAA 828 0.4408 MAKKSIGSLMRKKLSDITNSTIPHSQQLDTFPSENNSIQQLLKERTALIQLLAERNKIIEVSGAALQRLRGDVKKLQLQNWNLAQSNSHPGASATSDETQPREMCVWSFGRQVLKGFQNLLEIDHEKNPPLSQLQEGDEKAGQPTPKASNDEQHKNMNRRRMRSKSTGSSTASKNTSKDKVKDNRRRLRRHSTTFKTHEHEPLENLFELEDATYLITQSGPNKLRSPTSKTERGENTVLRREAPRCSFGRPLRRAVQKVQSYKEIPLNVKMRRLA 275
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00841 275 Pfam Shugoshin C terminus 249 273 IPR011515 GO:0000775|GO:0005634|GO:0045132
Cca04g00841 275 MobiDBLite consensus disorder prediction 128 194 - -
Cca04g00841 275 PANTHER SHUGOSHIN 1 274 - -
Cca04g00841 275 PANTHER SHUGOSHIN 2 1 274 IPR044693 GO:0000775|GO:0034090|GO:0045144
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Cca04g00841 Cca-Chr4 8728898 8733695 Dispersed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00841 - - gmx:102665348 369.777