Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00836 ATGGAGAAGGTGATGAACATTCTGAAGCCGAAGCCAAATCCGCAGCAGCTATTGAGAGATTGGCAGCGCAGGCTTCGCCAAGAGTGTCGCAACATTGAGCGTCAAATTCGCGATATACAGAGAGAAGAAAAAAATGTGCAGAAGGCGATTAGAGAAGCTGCGAAGAGGAATGATATGGGCTCTGCAAAGGCACTTGCCATGGAACTTGTGAGATCTAGGAAAACAGTGAACCGTCTTTATGAAAATAAAGCACAAATGAATTCAATATCGATGCACCTTGGAGAGAGTGTTGCAATTGCTCGTACTGTGGGACATCTATCAAAGAGCGCCGAGGTTATGAAGATTGTCAATAACCTCATGAAGGCCCCTGAGATGGCTGTTACAATGCAAGAATTTAGCAAAGAAATGACAAAGGCAGGAGTGATTGAAGAGATAGTAAATGATGCCGTGGACACTGCACTAGATTCCGAGGACATAGAAGATGAGATAGAAGAAGAAGTCGAGAAAGTCTTGACCGCAATAGCTGGTGAGACAGCTGCGCAACTTCCTGAAGCCGTGAGGAAAGAAAGGGTTAAACAACCCGCTCAAAGTGTTGGAGCCGCCGAGGAAGATGCTATAGCTGAGGGTGTTGATGATGAGGAAGAAATGGAAGAAATTAGGGCCAGACTTGCTAAAGTTAGGTCATAA 687 0.4512 MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIREAAKRNDMGSAKALAMELVRSRKTVNRLYENKAQMNSISMHLGESVAIARTVGHLSKSAEVMKIVNNLMKAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDTALDSEDIEDEIEEEVEKVLTAIAGETAAQLPEAVRKERVKQPAQSVGAAEEDAIAEGVDDEEEMEEIRARLAKVRS 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00836 228 Gene3D - 9 185 - -
Cca04g00836 228 Coils Coil 18 59 - -
Cca04g00836 228 Pfam Snf7 21 189 IPR005024 GO:0007034
Cca04g00836 228 MobiDBLite consensus disorder prediction 186 213 - -
Cca04g00836 228 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 228 - -
Cca04g00836 228 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 228 IPR005024 GO:0007034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00836 K12193 - gmx:100780989 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00836 04 8643856 8648333 Cca04g00836 04 8643856 8648333 ECH