Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00832 ATGGAGCCTGACAGGTTAAATTCCCCAACAACATTTGAGATGCCGTTGGAGGTTTTGGGCCATGAGTTGCAGTTTTCTCAGGATCCCAATTCCAAGCACCTAGGGACTACAGTATGGGATGCATCACTTGTGTTTGCCAAGTTTCTTGAACGGAATTGCAGAAAGGGAAGGTTTTCCCCAGCTAAACTTAAAGGAAAACGTGTAATTGAATTAGGAGCTGGCTGTGGTGTTTCTGGTGTTGGCATGGCTTTGCTGGGGTGTGATGTTATACTGACAGACCAAAAGGAGGTTTTGCCATTATTACAGAGAAATGTTGAGCGTAATATCTCAAGGATCATGCAAAAGAATCCTGAGTCATTTGGTTCAATCAAGGTTGCTGAGCTTCAGTGGGGAGATGAGAGTCACATTAAGGCTGTTGGTCCTCCATTTGACTACATTATTGGCACTGATGTTGTTTATGTAGAGCATCTATTGGAGCCTCTATTACAGACAATACTTGCTTTATCTGGACCTAGGACTACAATTTTGTTGGGCTATGAGATCCGCTCCACAAGTGTCCATGAGAAGATGCTTCAAATGTGGAAAAGAAACTTTGACGTGAAGACTGTCTCAAAGTCCAAGATGGACGAAACATTTCAACATCCAAGTATTCAACTCTTCATTATGGAATTTAAACATTCAGCAGAGTGCACAGAGAACTCGGGTCAGGCAACTGTTAAAGTTGATATTGAAACTGGTGTGGAGGATAAAAGCAGCAAGGGAAATGTTATAGTCGAAGGATCTGGTCCCGCTGAAGAAACTGTCGAGGATCACAGTAAGCCAATCTCGCAAAATGCGAAGCTTAGTGAGTGGGAAGCCAGAAGGTATGGATCAATGGCTGCAAGGGTTTTGCGAGATGTAAAAATATCCTGA 912 0.4298 MEPDRLNSPTTFEMPLEVLGHELQFSQDPNSKHLGTTVWDASLVFAKFLERNCRKGRFSPAKLKGKRVIELGAGCGVSGVGMALLGCDVILTDQKEVLPLLQRNVERNISRIMQKNPESFGSIKVAELQWGDESHIKAVGPPFDYIIGTDVVYVEHLLEPLLQTILALSGPRTTILLGYEIRSTSVHEKMLQMWKRNFDVKTVSKSKMDETFQHPSIQLFIMEFKHSAECTENSGQATVKVDIETGVEDKSSKGNVIVEGSGPAEETVEDHSKPISQNAKLSEWEARRYGSMAARVLRDVKIS 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00832 303 Pfam Lysine methyltransferase 21 186 IPR019410 -
Cca04g00832 303 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 61 183 IPR029063 -
Cca04g00832 303 Gene3D Vaccinia Virus protein VP39 14 230 IPR029063 -
Cca04g00832 303 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN 1 247 - -
Cca04g00832 303 CDD AdoMet_MTases 67 181 - -
Cca04g00832 303 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 1 247 IPR019410 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00832 Cca-Chr4 8551766 8556525 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00832 K21806 - gmx:100814314 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00832 04 8551766 8556525 Cca04g00832 04 8551766 8556525 ECH