Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00819 ATGAAATTGTGGGAATATGAAGGGCGAAATCGGTCATTTGAAGAAAGCGAAAGCGAAAGCGGCAGCAATCCTCTGGCTGCTTCATCCGCATTGTGCTTCCGCTTTCGCGCCGCTCCCATGGCCGACCTGGGGAAGATACTCTACATAGTCGTGCACGACGACGCCGACAACAAAGACTCCTTCCGTTACACGCGCTCCCTTCTCCAGAGCACGCTCCAGCTCATGGGATGCAAGGCGCGTCACGCCTTCAAGATCAGTCAAAGAGTTTTTGAACTCACAAGGAAAGAGAGTTCTACCGATAATTTGCTGCCTGAAGCAGAGGCTTTATCAGGTTTTGATGCTTTCAAGGTGAATTTAGCGAAGAAAGGTGGTCAACATGCTGATGTTTACCCAGGTAAAGCAGACTTAGGCAACCAAATACCATTGGGGAAAGATTCTAGAATCAAGAGTGTACCATTTGAGTTGTACAAAAGACGCACATCTGCATTTGTTCGGAGAGAAATTTTTCTAGATATTGTCTGCGATGCTCTGGCAGAGTACAAGTATGTGAGTCCTAACCAGAGAGCAGACTTGGTATTAGCCTGCAGGATCCGTGAACGGAAAGAGTCCGTGACAGTTCTATTGTGTGGCACTAGTGGCTGTGGCAAATCCACATTGTCTGCATTGCTGGGTAGTAGGTTGGGAATCACAACTGTGGTATCAACTGATTCTATTAGGCACATGATGAGAAGCTTTGCTGACGAGAAAGAAAACCCCTTGTTGTGGGCTTCTACATACCATGCCGGAGAGTGTTTGGACCCTGTTGCTGTTGCAGAAGCTAAGGCTAGACGGAAAACAAAAAAGCTGGCTGGTGTTTCGCATTCACTTCCAAAGGATGAAGTACCTGAGGGTCAAAATTCTAGCAAATCAGATATTAGGATGTCAGAGACGAGCTCTGGTCCTACTGAACTGCTAAGTCCAAAACAAATGGCTATTGAAGGATTTAAGGCACAGAGTGAGATGGTGATTGACAGTCTTGATAGGCTAATTACTGGATGGGAAGAACGAAAGCAGTCCGTTGTTGTTGAGGGTGTTCACCTGAGCCTCAACTTTGTTATGGGGCTCATGAAGAAGCATCCTTCAATCATACCATTCATGATACATATTACAAATGAGGACaagcacttggaaagatttgcggtacgggccaagtatatgacactggacccagctaaaaacaagtatgtaaagtatatcagaaacatcagaacaatccaggattatctctgcaagcgtgctgaaaagcatttagttcccaaaataaacaatactaatgttgacaagagtgtagcagccatccatgcaactgtcttcagctgtcttcgaaggcgTGAAGTTGGAGAACAACTATATGATCCTGTTAGAAATACTGTAACAGTTATTTATGAGGAATATAGAAATCAATGTGCAGCCAATTCTTTGAACTCGAAAGGGATGTTTCAATTGATCCAGAGAAAAGGTTCTTCAAGGAATCTGATGGCTCTTGTTAATACTGATGGGTCTGTGGCGAAGGCTTGGCCTGTTAACTTAATTGACTGTAATGGGAAGCCAGTATGGGGCTATGGACCAGAGAATGGAATTGGACATCCAATGTATGGTCCCTTGAGAATTGGCAAGGCAGAACCTGTAAATCTTCAGTTTGGTTTTTATGGGATCAGTGCATGGCCAAGTGATGGTGGCACTAGTCATGCTGGAAGTGTTGACGAGTCTAGAGCTGATGGGACTGATACAGGTAGTAGATACCTATCTTCTTGCTGTAGCTCACCAAGGATGTCGGATGTTGCTGCAAAAGAGCTCAAGGAGGACTTCTCGGTGCATGGTAGTGATGAAGAGATTGACGATCAACCAGAGGTGGGCAGTGATGAGGATTTCAGTGATGATGGCGACAAGCATGCCCATGAAGAGGTAGGATCAGTTGACGAGGAATCAACAAAATCTGATGAAGAGTACGAAGACCTTGCAATGCAAGATGTGCTGGAAAATGGGTATTGGACAGATGATGATGATGAGTTTAGGAATAAGGTTGGTGGTGTTGGCGGGGAGGTAGGAACTAAAATGCATGGGGGAAACAAGTATCGTCGAAACCTTGATCTTTTCCTTAGAAGTAGAAGTGAGCCAGTGGCAATGGCAGCGGCTGTTCAGGAGCCACTGTGCTCGTATTCCTCTTTGCTCCATGAAAGGAGGGAAAGGAAAGCCAAATTAAGAACACGTTCTCTTAGTATTCCTGCATTAGGAAAGCATAATTCAGCAGTCAATGATCCCATCCTTTCTGGTGCTCCTCAGAGTTGTTGCTTCATTGCTTGTATGGATGGATGTTGTGTGACAATTTTCGTCAAACATTTTTTTCGAGCTTGTATAAAGTATGGGATTCGCGGAATCAACATTGTCTAA 2430 0.4099 MKLWEYEGRNRSFEESESESGSNPLAASSALCFRFRAAPMADLGKILYIVVHDDADNKDSFRYTRSLLQSTLQLMGCKARHAFKISQRVFELTRKESSTDNLLPEAEALSGFDAFKVNLAKKGGQHADVYPGKADLGNQIPLGKDSRIKSVPFELYKRRTSAFVRREIFLDIVCDALAEYKYVSPNQRADLVLACRIRERKESVTVLLCGTSGCGKSTLSALLGSRLGITTVVSTDSIRHMMRSFADEKENPLLWASTYHAGECLDPVAVAEAKARRKTKKLAGVSHSLPKDEVPEGQNSSKSDIRMSETSSGPTELLSPKQMAIEGFKAQSEMVIDSLDRLITGWEERKQSVVVEGVHLSLNFVMGLMKKHPSIIPFMIHITNEDKHLERFAVRAKYMTLDPAKNKYVKYIRNIRTIQDYLCKRAEKHLVPKINNTNVDKSVAAIHATVFSCLRRREVGEQLYDPVRNTVTVIYEEYRNQCAANSLNSKGMFQLIQRKGSSRNLMALVNTDGSVAKAWPVNLIDCNGKPVWGYGPENGIGHPMYGPLRIGKAEPVNLQFGFYGISAWPSDGGTSHAGSVDESRADGTDTGSRYLSSCCSSPRMSDVAAKELKEDFSVHGSDEEIDDQPEVGSDEDFSDDGDKHAHEEVGSVDEESTKSDEEYEDLAMQDVLENGYWTDDDDEFRNKVGGVGGEVGTKMHGGNKYRRNLDLFLRSRSEPVAMAAAVQEPLCSYSSLLHERRERKAKLRTRSLSIPALGKHNSAVNDPILSGAPQSCCFIACMDGCCVTIFVKHFFRACIKYGIRGINIV 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00819 809 MobiDBLite consensus disorder prediction 616 661 - -
Cca04g00819 809 MobiDBLite consensus disorder prediction 637 653 - -
Cca04g00819 809 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 2 40 773 - -
Cca04g00819 809 PANTHER P-LOOP NTPASE DOMAIN-CONTAINING PROTEIN LPA1 HOMOLOG 1 40 773 - -
Cca04g00819 809 MobiDBLite consensus disorder prediction 573 600 - -
Cca04g00819 809 MobiDBLite consensus disorder prediction 281 316 - -
Cca04g00819 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 205 456 IPR027417 -
Cca04g00819 809 MobiDBLite consensus disorder prediction 293 316 - -
Cca04g00819 809 Gene3D - 200 458 IPR027417 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00819 - - gmx:100776549 1246.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00819 04 8378488 8383984 Cca04g00819 04 8378488 8383984 ECH