Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00800 ATGTTAGAGGACATTGAATCATCTAGTCCAATTTGTAACATGGGTTTTGGTCGAAATTCAAAATCATCAACAAGTGGAGATTACTTGGAAGGGATGCTTAATGACTATGTTGGAGGAAGGTCTAAAGTGAAGGCTCCAAAGAGTGCCTCAATAAAGTTTGTGGCAGCACTCACATGCCTTCAGTTTTTCTTTGCAATTTATGCAACATTCCTATTGTATTACATGGGCCCTTCCATTGATTTACGAACCAAGCCAGAGTTCACATGGGCCACAAAAATTGCACAACAATGGAAGCAACTTATGATCACACCCCACGTTGTTGGCCACTACCAAGAAGCTGCTTCCTCCCTCATCAAGGAGGATGTTGATGTTCTTCCCATAACTCCTTCCCAAGTATGTGAAAATGAGAAGATAGACTTTGGGCAAAAGAAGTCCAATGATGTCCAAATGATCAAGTTAAAGAGAGAGCTCTACGAGGAGGTGTTGAACTTCCAAAGCAAAACCATTGGCACTGAGACTCTCCAAGAGTTAATGGCAATGAAATCCAAGTGGGATTTGAAGGGTCCTAATAGGCCTAAAATCACAGTGCTGCTAAACCACTTCAAGAGAAAGACACTTTGTGCTCAGCTTGACTCTTTGCTCCAACAAACCCTACCTTTCCATCATGCTTGGGTGCTTTCATTTGGGAGCCCCAATGAGGCCTCACTAAGGAGAATTGTGGACACCTATAATGACTCAAGAATCAGTTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTTCAAATGGCTCTTCAGACTGAAGCTGATCTTGTGTATGTTGTTGATGATGACATGATTCCTGGAAGAAAGATGTTGCAGATTTTGGCACACGTGGCAGGCACGGACAAGTACAAGAACTCTGTCTTGGGGAGTATTGGAAGGATATTGCCCTTTAGGCAGAAGGACTTCACGTTTCCAAGTTACAGAAAATTTCGGTCTAAGGAGGCTGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAAATTGTGCAAGTGGATTTTCTTTCTAGTTCATGGTTTCTCTCAGCTGATCTTGTCAAGACACTTTTCATCGAGACACCTTTTACCTTCTCAACTGGTGAAGATCTGCACCTCAGTTATCAGCTTCAGAAGTACAGAAATGCTGCCTCTTTTGTTCTTCCGGTAGACCCCAAGGACAAGGAAACTTGGGGTGACAGTGAACACAGACTTGCATATGTGTCTGAAACCACAGTGATTTTCAAGGACATAGTTCAAGTCAGAGATGATCAGTGGTGGAAAGCACTTTCTACAGGCTATGTGACTCAGTGGGCTGCAATGCACCCTCAAAAAGTTGATGCACTCTTCTATGCTCACTCAGTTGATGAAGTGAAAGCCCTTGCACCACTTCTTGAAAAGTTCAGGTCCACAGTTGGCAAGAAGGCCTACATCGCGGTCTCTGGAGGCAGTTTCTGCCCCTGTGAAGATGCTGCAACAGCTCTCAAATGGCCTTCATTGGTCTGCAAAGAACGCAGGTTTAAGATTTTTGATTTGGCCATTGGAACACTTTCTGGGGTGTCAAACTCAGAGGCACCAGTGATACAAGCAGTGTACACCAGCATGAAGGGTTTGATCAAAATTCACAATCCCAGTGTAATCATCAGTGTGGCTGACATTGACCCTCATGTGAGGAAAGCTCTCAAGATGGCATCAGAAACCAATTCAAATGCCACCACATTGGTTCTCTTACCCAGGGCTTCGGTGTCTCAAGTTCTTTGGATGGCTGATCTACGTTCAACAGCATTACCAAATTGGAATAGGATGAGGATTTCTGTGAACATCATCACCCAAAACAGGGCCAATTCACTATCAAGGCTTCTCAAATCTCTGACCGATGCCTACTACCTAGGAGATGAAATTCCCATCACCTTCAACATGGATAGCAAGGTGGACGAGGCAACCATAAGACTAGTGGGTACATTTGAGTGGCCTCATGGGCCCAAAACCCTGAGAAGGAGAATCATCCAAGGTGGGCTCATCCGGGCTGTGAGTGAGAGCTGGTACCCATCTTCTGATGATGACTTTGGGCTCCTACTTGAAGATGACATTGAAGTTTCCCCTTACTACTACCTATGGATCAAATATGCACTCATGGCATACCACTATGACCCCCAAGtctctctccctcagctctcctccatctctctctACACTCCAAAACTTGTTGAAGTTGTCAAAGAGAGGCCTAAATGGAATGCCACAGAGTTCTTCAAAAACATCCACCAAAACACACCTTACTTACACCAATTACCATGCAGTTGGGGGGCAGTGTTCTTCCCCAAGCACTGGAGAGAGTTCTATGTGTACATGAACATGAGGTTCACTGAGGATGCCAAGGCCAACCCAGTTCAAATTCCAAAGTCTAGAACCAACGGATGGCAAGCCTCATGGAAGAAGTTCCTCATAGACATGATGTACCTTAGAGGGTATGTTAGTCTCTACCCAAATTTCCCACAACAAGCAAGCTTTTCAACCAACCACATGGAACCTGGGGCACATATTAGTGCAAAAGACAATGTGGTTAAGCACAACAAACAGGACTTTGAGGTGCCACTATTGAAACAAGACTTCAGAAACTTGTTGCCAGGAATGAAAATGCCACCAGCATCAAGGCTTCCATCACTAAACCTCTTTAACCAACCAGTTTCTCTAAAGGGTCTTAAAGCTGCAGGAGCTAAGTTGGGCCAGGACGTGCTTAGATGTGACAATGCCACTGAAGTTGTTGCTGTTGATCAAGATACTGGTCTACCTCACACTTGCTCCAAATTCTGA 2847 0.437 MLEDIESSSPICNMGFGRNSKSSTSGDYLEGMLNDYVGGRSKVKAPKSASIKFVAALTCLQFFFAIYATFLLYYMGPSIDLRTKPEFTWATKIAQQWKQLMITPHVVGHYQEAASSLIKEDVDVLPITPSQVCENEKIDFGQKKSNDVQMIKLKRELYEEVLNFQSKTIGTETLQELMAMKSKWDLKGPNRPKITVLLNHFKRKTLCAQLDSLLQQTLPFHHAWVLSFGSPNEASLRRIVDTYNDSRISFISSSYDFKYYGRFQMALQTEADLVYVVDDDMIPGRKMLQILAHVAGTDKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSADLVKTLFIETPFTFSTGEDLHLSYQLQKYRNAASFVLPVDPKDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQKVDALFYAHSVDEVKALAPLLEKFRSTVGKKAYIAVSGGSFCPCEDAATALKWPSLVCKERRFKIFDLAIGTLSGVSNSEAPVIQAVYTSMKGLIKIHNPSVIISVADIDPHVRKALKMASETNSNATTLVLLPRASVSQVLWMADLRSTALPNWNRMRISVNIITQNRANSLSRLLKSLTDAYYLGDEIPITFNMDSKVDEATIRLVGTFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALMAYHYDPQVSLPQLSSISLYTPKLVEVVKERPKWNATEFFKNIHQNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPQQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKQDFRNLLPGMKMPPASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCDNATEVVAVDQDTGLPHTCSKF 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00800 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 191 392 IPR029044 -
Cca04g00800 948 PANTHER - 41 948 - -
Cca04g00800 948 SUPERFAMILY Nucleotide-diphospho-sugar transferases 612 804 IPR029044 -
Cca04g00800 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 614 863 IPR029044 -
Cca04g00800 948 PANTHER OSJNBA0004B13.7 PROTEIN 41 948 - -
Cca04g00800 948 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 177 401 IPR029044 -
Cca04g00800 948 CDD Glyco_tranf_GTA_type 204 295 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00800 - - gsj:114374559 1777.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00800 04 8013565 8018785 Cca04g00800 04 8013565 8018785 ECH