Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00777 ATGGGTGGAAGAAAGTGGAGCCTCTTGGTGGCCATCTTTATCTTACTTATTGCTATGGATGCTGCCATAGCTCaaggtcaaggaaatggcaatggcaatggtaatggtaatggtaatggtaatggaaatggtaatggcaatggcaaaggcaagggtgatgataatggaaagggtaagggaaaagagaagaaggagaaggagaaggagaagaaggaaaaaaaggaaaaagagaaaaaggcaaaAAAGCAAAGTGATGAAGCATCAAATTATGACCACTTGTCAACTTTGCCATCGGGTCAAGAACGAGGGTTCTGCAGAGCAAACACAACCTGTGAGTTTAAGACCATCGTGTGTCCACCCGAGTGCGCAGagaggaagcccaagaagaacaagaagcagaagGCATGTTTCATTAATTGCAGCAGTAGCACATGTGAAGCCACTTGCAAGGTTAGAAAGGCTAAATGTGATGGGTATGGTTCTCTGTGTTATGATCCTCGCTTTGTGGGTGGTGACGGTGTGATGTTCTACTTCCACGGTGCCAAGGGAGGAAATTTTGCCATTGTTTCTGATGTTGAGTTCCAAATCAATGCTCACTTCATTGGTACACGACCACAAGGAAGGACTCGTGACTACACATGGGTGCAAGCACTTTCTGTCATGTTCGACACACACACTCTTGTTATTGCAGCCAATAGAGTCTCTCATTGGGATGAAAGCGTTGACTCTCTCACAATAAAATGGAATGGTGAACTTATCAACGTTCCTACCGATGGAGAGGCTGAATGGAGGGCCAATGGTGATGAAAGAGAAGTGGTTGTGGAGAGAACCGATGAGGCAAACAGTGTGAGAGTGACAATTTCAGGTTTGGTTGAGATGGACATTAGTGTGAAGCCTATTGGAGAGCATGAAAACAAGGTTCACAATTACCAGTTGCCATCAGATGATGTTTTTGCTCATTTGGAGACTCAGTTCAGGTTTAAGAAAAGTACCGATAATTTTGAAGGAGTGTTGGGTCAGACTTACAGGCCAGGGTATGTTAGCCCTGTGAAGAGAGGGGTTCCTATGCCAATGATGGGTGGGGAGGACAAGTACCACACTCTCTCTCTCTTTTCAACATCTTGCGACCTATGTAAGTTCCAGAGGCCATCTGGGGTAGCAAGCACCGAAGGACTAGTTGCTCAGTATTGA 1191 0.3804 MGGRKWSLLVAIFILLIAMDAAIAQGQGNGNGNGNGNGNGNGNGNGNGKGKGDDNGKGKGKEKKEKEKEKKEKKEKEKKAKKQSDEASNYDHLSTLPSGQERGFCRANTTCEFKTIVCPPECAERKPKKNKKQKACFINCSSSTCEATCKVRKAKCDGYGSLCYDPRFVGGDGVMFYFHGAKGGNFAIVSDVEFQINAHFIGTRPQGRTRDYTWVQALSVMFDTHTLVIAANRVSHWDESVDSLTIKWNGELINVPTDGEAEWRANGDEREVVVERTDEANSVRVTISGLVEMDISVKPIGEHENKVHNYQLPSDDVFAHLETQFRFKKSTDNFEGVLGQTYRPGYVSPVKRGVPMPMMGGEDKYHTLSLFSTSCDLCKFQRPSGVASTEGLVAQY 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00777 396 MobiDBLite consensus disorder prediction 33 95 - -
Cca04g00777 396 Pfam Root cap 324 380 IPR009646 -
Cca04g00777 396 Coils Coil 57 86 - -
Cca04g00777 396 PANTHER ROOT CAP/LATE EMBRYOGENESIS-LIKE PROTEIN 1 386 - -
Cca04g00777 396 MobiDBLite consensus disorder prediction 33 48 - -
Cca04g00777 396 MobiDBLite consensus disorder prediction 52 88 - -
Cca04g00777 396 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 1 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00777 Cca-Chr4 7728426 7730162 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00777 - - gmx:100789697 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00777 04 7728426 7730162 Cca04g00777 04 7728426 7730162 ECH