Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00776 ATGATGAAGAACCAGTTAGTCTTGTCTTTCTCAATAGCACTGCTACTTTCATTTTTGTATTCCACAACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCTCTAAAACCACCTCAACCAGCCCCTACCCCACCAGCTGAGGCACCTAAACAACCATTGGTTCCCTCGTTGCCAGAGTCACCAAGTGATTCCACCCCTGACACTGCAGCAGCAGTTGACATCGTTGGAATCCTGAGGAAGGCCAAGTCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAGCTCCTCACTACTAAGGCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGACGGACAAAAACTTGAGCTCTTACAGTTCCACGTTATTTCAGAGTATGTATCTAGCTCCAACTTTGATACACTCACAAACCCCGTGAGAACACTTGCAGGGGCTAAACCTGGAAAGGTGGAATTGAATGTGGTAAGCTACGGTGGAAGTGTGAACATATCAACAGGTGAGGTAAACACAACCATCGCTGGAATTATATATACGGATAAGCATCTTGCTATTTATAAGGTTGGAAAGGTGCTTCTTCCTATGGACTTCTTTGCAGTGGCCAAGGCACCTGCAAAGGGGCCCTCATTGGCACCAGAACCTTCAGCAAAGGCTCCTAAACCTGATAAGGACCCATTATCCCCAGATTCCTCAGAATCATCTCAGATTAATTCCACAAACGAGAACTCTGGCACTGTGAAGATCAATGTGCATGGAAAGTGGGTGCCCCTTGTTCTTGGACTAGTTCTCATGACTCTATTCTCATCATAA 879 0.4596 MMKNQLVLSFSIALLLSFLYSTTTLAQLSPASAPLKPPQPAPTPPAEAPKQPLVPSLPESPSDSTPDTAAAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKAGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTIAGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPEPSAKAPKPDKDPLSPDSSESSQINSTNENSGTVKINVHGKWVPLVLGLVLMTLFSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00776 292 MobiDBLite consensus disorder prediction 251 267 - -
Cca04g00776 292 SUPERFAMILY FAS1 domain 69 218 IPR036378 -
Cca04g00776 292 MobiDBLite consensus disorder prediction 33 56 - -
Cca04g00776 292 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Cca04g00776 292 Pfam Fasciclin domain 83 217 IPR000782 -
Cca04g00776 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 289 IPR045003 -
Cca04g00776 292 MobiDBLite consensus disorder prediction 31 67 - -
Cca04g00776 292 SMART fasc_3 113 218 IPR000782 -
Cca04g00776 292 MobiDBLite consensus disorder prediction 230 267 - -
Cca04g00776 292 Gene3D FAS1 domain 57 217 IPR036378 -
Cca04g00776 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00776 Cca-Chr4 7726078 7727399 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00776 - - gmx:100776667 429.869