Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00773 ATGAGTTCAGTTGCTTCTGGGATGCATTATGGTGTACATTCCTTTGTTATGCCTAATCTTTGGATGGCTATTGTCATTTTGAGGCTTTCCATATATTTCCCTCCCTCCATCATCACCCCACAATCAAGCACTCACTTCAAGGACCACCCTTCCATTCTCACCACACCCTCCTCACTCCACTCACCAAAAGATGGTGACCATGACCATGAAGCATCATCCACGTCCACTACTCTTCTCTCTCTCACTTCTTCTACTACTCTCCTCCCATTCCACCACCACTTTAGCCCAATCACCTGCATCGGCCCCAGCCGCCTCGGCCACCGCCATGCGGTGGCCACCCCGGCGCCGACACCTTCCTCAGCCCCCACAGACATCATCAGAATCCTCAAAAAGGCTGGTGGTTTCACAACCCTAATCCGCCTCCTTCAAACCACACAAGTCTCCAACCAAATCAACTCCCAACTCCTCACTTCAAACGGTGGCCTAACCCTATTTGCACCAAACGACAACGCCTTTTCAAGCCTCAAACCAGGTTTCCTCAACTCCCTCAATGACCAACAAAAGAATGAGCTCATCCAGTTCCACTTGCTACCCCAATACGTTTCCACGTCAAACTTTGACACTCTAAGCAACCCTGTAAGAACACAAGCTGGTGAAAACCCTGATAGGTTGGCACTTAACATAACAAGCTCAGGAGGAAACCAAGTGAACATGACAACGGGAATAGTTAACGTTACATTGGGTGGCACTGTGTACACTGATCACCAACTTGCGGTGTATCAAGTGGACAAGGTGCTTCTTCCACGTGACTTCTTTGTTGCTAAGCCTCCTGCTCCAGCTCCTGCGCCAGAAAAGTCTAAAGGGTCGAAGAAGAAATCTGCAGACAGCACTGCAACTGAAGCAGATGATGCTGAATCTGCTGCTATCAGTGTGAAACAACGGCATGTTATGTGGGTTGTTGTTACAGTTTTGGTTGCAGCGTTTTCGTGGTGA 993 0.4884 MSSVASGMHYGVHSFVMPNLWMAIVILRLSIYFPPSIITPQSSTHFKDHPSILTTPSSLHSPKDGDHDHEASSTSTTLLSLTSSTTLLPFHHHFSPITCIGPSRLGHRHAVATPAPTPSSAPTDIIRILKKAGGFTTLIRLLQTTQVSNQINSQLLTSNGGLTLFAPNDNAFSSLKPGFLNSLNDQQKNELIQFHLLPQYVSTSNFDTLSNPVRTQAGENPDRLALNITSSGGNQVNMTTGIVNVTLGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKSKGSKKKSADSTATEADDAESAAISVKQRHVMWVVVTVLVAAFSW 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00773 330 Pfam Fasciclin domain 134 268 IPR000782 -
Cca04g00773 330 ProSiteProfiles FAS1/BIgH3 domain profile. 122 266 IPR000782 -
Cca04g00773 330 SUPERFAMILY FAS1 domain 109 269 IPR036378 -
Cca04g00773 330 MobiDBLite consensus disorder prediction 277 303 - -
Cca04g00773 330 SMART fasc_3 163 269 IPR000782 -
Cca04g00773 330 MobiDBLite consensus disorder prediction 285 299 - -
Cca04g00773 330 MobiDBLite consensus disorder prediction 49 75 - -
Cca04g00773 330 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 110 325 IPR045003 -
Cca04g00773 330 Gene3D FAS1 domain 104 269 IPR036378 -
Cca04g00773 330 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 110 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00773 Cca-Chr4 7695360 7698547 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00773 - - gmx:100791643 326.25