Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00772 ATGAAGCATGTTCTGTTCTCCCTCTTACTTATCATGCCTTTTTCAACCTTATATTCAACCACAACATTAGCCCAAGCACCTGATGCAGCCCCATCAAAACCAATTGTGCCAACACTACCCCACTCACCCTCTGAAGACAACTCTGATTCTTCCACTGATGACATCATCAAAATACTAAGGAAGGCCAAATCATTCAACGTCCTAATTCGCCTACTGAAAACCACCCAATTGATCAACCAAATCAGTTCTCAGCTCATAACTATAAAATCAGGTGGCTTAACCATCTTTGCACCAGATGATGGTAGCTTTTCACAACTCAAAGTTGGGTTCCTCAACTCACTGGCTGACAATCAAAAGATTGAACTTCTGCAGTTCCATATCCTTCCCACTTATGTTTCAAGCTCAAACTTTGATTCTCTAAGCAACCCTGTGAGAACACTAGCCGGGGATAACCCCACCAGGTTGCAACTAAATGTGACAGCATATGGCAACAATGTGAATATCTCAACAGGAGTGGTTAATGCCACGGTCACAGGAATTGTGTACTCAGATAAGGTGCTAGCAATATATCATGTGGACAAGGTGCTTCTTCCTTTGGACTTCTTCAAGCCTAAGCCACCAGCTCCTGCACCCTCTCCTGCAATAGAGCCAAAAGCTGATAATGATAACTCATCTACCGATGGTCTTGGAACATCCAAGGACAGCGCTGGTGCATGCAGTTTGACGAGTACACAAGGAACAACATTGGTGTCCCTTGGAGTTGCCTTAGTTGCAATGGTGATTATATCAAGTTGA 795 0.4365 MKHVLFSLLLIMPFSTLYSTTTLAQAPDAAPSKPIVPTLPHSPSEDNSDSSTDDIIKILRKAKSFNVLIRLLKTTQLINQISSQLITIKSGGLTIFAPDDGSFSQLKVGFLNSLADNQKIELLQFHILPTYVSSSNFDSLSNPVRTLAGDNPTRLQLNVTAYGNNVNISTGVVNATVTGIVYSDKVLAIYHVDKVLLPLDFFKPKPPAPAPSPAIEPKADNDNSSTDGLGTSKDSAGACSLTSTQGTTLVSLGVALVAMVIISS 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00772 264 SMART fasc_3 94 199 IPR000782 -
Cca04g00772 264 MobiDBLite consensus disorder prediction 208 237 - -
Cca04g00772 264 MobiDBLite consensus disorder prediction 218 237 - -
Cca04g00772 264 SUPERFAMILY FAS1 domain 51 199 IPR036378 -
Cca04g00772 264 Pfam Fasciclin domain 64 198 IPR000782 -
Cca04g00772 264 PANTHER FASCICLIN DOMAIN PROTEIN 1 261 - -
Cca04g00772 264 ProSiteProfiles FAS1/BIgH3 domain profile. 52 196 IPR000782 -
Cca04g00772 264 Gene3D FAS1 domain 36 198 IPR036378 -
Cca04g00772 264 MobiDBLite consensus disorder prediction 29 51 - -
Cca04g00772 264 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 261 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00772 Cca-Chr4 7690604 7691608 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00772 - - gmx:100791112 421.394