Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g00771 | ATGAAACAAGCAACCCTTTTCTCCATCTCACTCTTGCTACTCCTTTCCTCCACCACCTTGGCCATTTCACCTGCACCTGCAGCAGCCCCTAAAGCCCCTGCAGCAAAAACTCGCCCTACCCCAAAGGCTGCAGCACCATCACCAAAACCATTAGTCCCCACATTACCTCAGTCTCCAGACTCTCCTGACTCAGTCCCTGATGACATCACCAGAATTCTCAAAAAGGCCAAAACGTTCTCAGTCCTAATCCGGCTCCTAAAAACCACCGAAATCATGAACAACATAAACTCACAGCTCATAACAGCCAAGAGTGGTGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCAGGCTTCCTCAACTCTTTAAACGAAGGCCAGAAAATAGAACTTGTGCAGTTCCACATATTGCCAGAATTTGTGTCCAGCTCTAACTTTGATTCTCTAAGCAACCCTGTGCAGACAGTGGCTGGAAAAGACCCTGCAAGGCTTCCACTGAACGTGAATGCATTAGGTAACAGTGTCAACATTTCAACTGGGGTAGTCAATGCCACAGTTCTGGGGGTAGTCTACTCGGATAATAAACTTGGCATATATCACGTGGACAAGGTGCTTCTTCCTCTAGATTTCTTTTTAACCAATAAAGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAGGCTCCCAAAGCTGCTAAGGATAACTCTTCTGAGGATGATCAAGATGAAACAAATCAGGATCAAAATAAATCTGGGGCAGTGAATTTGGTTAGCATTAGCGGAACAACGTTGATGTCACTTGGGATAGCTTTGGTGGCATTGGCAACCATGTGGAGTTGA | 852 | 0.4601 | MKQATLFSISLLLLLSSTTLAISPAPAAAPKAPAAKTRPTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKTFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFLTNKAPALAPTTLAKAPKAAKDNSSEDDQDETNQDQNKSGAVNLVSISGTTLMSLGIALVALATMWS | 283 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g00771 | 283 | MobiDBLite | consensus disorder prediction | 230 | 254 | - | - | |
| Cca04g00771 | 283 | Pfam | Fasciclin domain | 78 | 212 | IPR000782 | - | |
| Cca04g00771 | 283 | PANTHER | FASCICLIN-LIKE ARABINOGALACTAN PROTEIN | 4 | 283 | IPR045003 | - | |
| Cca04g00771 | 283 | MobiDBLite | consensus disorder prediction | 236 | 250 | - | - | |
| Cca04g00771 | 283 | Gene3D | FAS1 domain | 54 | 212 | IPR036378 | - | |
| Cca04g00771 | 283 | PANTHER | FASCICLIN DOMAIN PROTEIN | 4 | 283 | - | - | |
| Cca04g00771 | 283 | ProSiteProfiles | FAS1/BIgH3 domain profile. | 66 | 210 | IPR000782 | - | |
| Cca04g00771 | 283 | SUPERFAMILY | FAS1 domain | 49 | 213 | IPR036378 | - | |
| Cca04g00771 | 283 | SMART | fasc_3 | 108 | 213 | IPR000782 | - | |
| Cca04g00771 | 283 | MobiDBLite | consensus disorder prediction | 43 | 60 | - | - | |
| Cca04g00771 | 283 | MobiDBLite | consensus disorder prediction | 26 | 67 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca04g00771 | Cca-Chr4 | 7687474 | 7688525 | Dispersed/Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca04g00771 | - | - | gmx:106794109 | 426.017 |