Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00770 ATGAAACAAGCAACCCTTTTCTCCTTCTCACTCTTGCTACTATTTTCCTCCACCACCTTGGCAATTTCACCAGCAGCAGCCCCTAAAGCCCCAGCAAAAACACCCCCTACCCCAAAGGCAGCAGCACCATCACCAAAACCATTAGTCCCAACATTACCTCAGTCTCCAGACTCTCCAGACTCGGTCCCAGATGACATCACCAGAATCCTCAAAAAGGCCAAAACGTTCTCAGTCCTAATCCGGCTCCTCAAAACCACTGAAATCATGAACAACATAAACTCACAGCTCATTACAGCCAAGAGTGGAGGCATAACCATCCTTGCACCAGATGATTCTGCCTTTTCCAACCTCAAAGCTGGCTTCCTCAACTCCCTAAACGAAGGCCAAAAAATTGAACTTGTGCAGTTCCACATCTTGCCCGAGTTTGTGTCCAGCTCAAACTTCGATTCTCTTAGCAACCCTGTGCAGACAGTGGCTGGCAAAGACCCTGCAAGGCTTCCACTGAACGTGAATGCGTTAGGCAACAGTGTCAACATTTCAACTGGGGTTGTCAATGCCACAGTTCTCGGGGTAGTCTACTCGGATAATAAACTTGGCATTTATCATGTGGACAAGGTACTTCTTCCTCTAGATTTCTTTCTAACCAATAAGGCTCCAGCTTTGGCTCCAACAACTCTTGCAAAGGCTCCCAAAGCTGCTAAGGATAACTCTTCTGAGGACGATCAAGATGATACAAATCAGGATCAGAATAAATCTGGGGCACTAAGTTTGGTTAGCTTTCGGGGAACAAAGTTGATGTCTCTCGGGATAGCTCTGGTGGCAATGACAACTATGTGGAGTTGA 843 0.4674 MKQATLFSFSLLLLFSSTTLAISPAAAPKAPAKTPPTPKAAAPSPKPLVPTLPQSPDSPDSVPDDITRILKKAKTFSVLIRLLKTTEIMNNINSQLITAKSGGITILAPDDSAFSNLKAGFLNSLNEGQKIELVQFHILPEFVSSSNFDSLSNPVQTVAGKDPARLPLNVNALGNSVNISTGVVNATVLGVVYSDNKLGIYHVDKVLLPLDFFLTNKAPALAPTTLAKAPKAAKDNSSEDDQDDTNQDQNKSGALSLVSFRGTKLMSLGIALVAMTTMWS 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00770 280 MobiDBLite consensus disorder prediction 26 63 - -
Cca04g00770 280 SMART fasc_3 105 210 IPR000782 -
Cca04g00770 280 Gene3D FAS1 domain 51 209 IPR036378 -
Cca04g00770 280 ProSiteProfiles FAS1/BIgH3 domain profile. 63 207 IPR000782 -
Cca04g00770 280 MobiDBLite consensus disorder prediction 227 250 - -
Cca04g00770 280 Pfam Fasciclin domain 75 209 IPR000782 -
Cca04g00770 280 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 4 280 IPR045003 -
Cca04g00770 280 MobiDBLite consensus disorder prediction 29 57 - -
Cca04g00770 280 PANTHER FASCICLIN DOMAIN PROTEIN 4 280 - -
Cca04g00770 280 MobiDBLite consensus disorder prediction 233 247 - -
Cca04g00770 280 SUPERFAMILY FAS1 domain 45 210 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00770 Cca-Chr4 7683157 7684408 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00770 - - gmx:100793759 410.609