Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00768 ATGTTGAGGAACCAATTTGTCTTGTCTTGCTCACTAGCATTGATAGTTTCATTTTTATACTCCACCACCACCACTTTTGCACAATTATCACCAGCTTCTACCCCTCAAAAACCACCCCAACCTAGCCCTACCCCACCAGTTGAGGCTCCCAAACAACCATTGGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACACTGCAGCAGCAGTTGATATAGTTGGAATCTTGAGGAAGGCTAAGTCATTTAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAATCAACTCAATGCACAACTCCTCACTACTAAGTCAGGTGGCATCACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTCAAAGCCGGCTTCCTCAACTCTCTTTCTGATGGACAAAAACTTGAACTCTTACAGTTTCACGTTATTTCAGAGTATGTATCTAGCTCTAATTTTGATACTCTCACAAATCCCGTGAGAACACTTGCAGGAGCTAAGCCTGGAAAAGTGGAACTAAATGTGATAAGCTATGGTGGAAGTGTGAACATATCAACGGGTGAGGTTAATACAACCATTACTGGCATTATATACACAGATAAGCATCTTGCTATATATAAGGTGGGAAAGGTGCTTCTTCCAATGGACTTCTTTGCTGTTGCTAAGGCACCTGCCAAGGGTCCCTCATTGGCTCCAGAACCTTCAAGTGATGCGGCAAAGGCGCCCAAAGCTGATAAGGACGAGTCATCATCTTCGGATTCGTCACAGGTTAAACCCACTGAACAGAACTCTGGCACCACCAAGATCAGTGTGTACGGAATGTGGGTGTCACTTGGACTTGCATTGGTGGCAGCAACGATGCAAACTTGA 882 0.4478 MLRNQFVLSCSLALIVSFLYSTTTTFAQLSPASTPQKPPQPSPTPPVEAPKQPLVPSLPQSPSDSTPDTAAAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPEPSSDAAKAPKADKDESSSSDSSQVKPTEQNSGTTKISVYGMWVSLGLALVAATMQT 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00768 293 MobiDBLite consensus disorder prediction 231 268 - -
Cca04g00768 293 Gene3D FAS1 domain 57 218 IPR036378 -
Cca04g00768 293 MobiDBLite consensus disorder prediction 29 68 - -
Cca04g00768 293 SUPERFAMILY FAS1 domain 70 219 IPR036378 -
Cca04g00768 293 ProSiteProfiles FAS1/BIgH3 domain profile. 72 216 IPR000782 -
Cca04g00768 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 IPR045003 -
Cca04g00768 293 Pfam Fasciclin domain 84 218 IPR000782 -
Cca04g00768 293 MobiDBLite consensus disorder prediction 34 57 - -
Cca04g00768 293 SMART fasc_3 114 219 IPR000782 -
Cca04g00768 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00768 Cca-Chr4 7674151 7675395 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00768 - - gmx:100819833 432.18