Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00767 ATGTTGAGGAACCAATTTGTCTTGTCTTGTTCACTAGCATTGATAGTTTCATTTTTGTACTCCACCACCACTTTTGCACAATTATCACCAGGTTCTGCCCCTCTAAAACCACCCCAACCTAGCCCTACCCCACCAGTTGAGGCTCCCAAACAAGCATTAGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACACTGCAGCAGCAGTTGACATTGTTGGAATCCTAAGGAAGGCTAAATCATTCAACATCCTAATTCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCTGGTGGCATTACCATTCTTGCACCTGATGACAGTGCCTTCTCAGAACTTAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAACTCGAGCTTTTACAGTTCCACGTTATTTCAGAGTATGTATCTAGCTCCAATTTTGATACCCTAACAAACCCTGTGAGAACACTTGCAGGAGCTAAACCTGGAAAGGTGGAACTTAATGTTGTAAGTTACGGTGGAAGTGTAAACATCTCAACGGGTGAGGTTAACACAACCATCACTGGCATTATATATACAGATAAGCATCTTGCTATATATAAGGTGGGAAAAGTGCTTCTTCCAATGGACTTCTTTGTAGTGGCCAAGGCACCAGAAAAGGGACCCTCATTGGCACCACAACCTTCAGCAAAGGCTCCTAAACCTGATAAGGACCCATTATCCCCAGATTCCTCAGAATCATCTCAGATTAATTCCACAAACGAGAACTCTGGTAATGTGAAAATCAATGCGCATGGAAAGTGGATGACCCTTGTTCTTGGAGTAGTTCTCGTGATTTTATTGTGA 873 0.4296 MLRNQFVLSCSLALIVSFLYSTTTFAQLSPGSAPLKPPQPSPTPPVEAPKQALVPSLPQSPSDSTPDTAAAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISEYVSSSNFDTLTNPVRTLAGAKPGKVELNVVSYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFVVAKAPEKGPSLAPQPSAKAPKPDKDPLSPDSSESSQINSTNENSGNVKINAHGKWMTLVLGVVLVILL 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00767 290 MobiDBLite consensus disorder prediction 251 267 - -
Cca04g00767 290 MobiDBLite consensus disorder prediction 33 51 - -
Cca04g00767 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 281 IPR045003 -
Cca04g00767 290 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Cca04g00767 290 SMART fasc_3 113 218 IPR000782 -
Cca04g00767 290 MobiDBLite consensus disorder prediction 230 267 - -
Cca04g00767 290 Gene3D FAS1 domain 55 217 IPR036378 -
Cca04g00767 290 Pfam Fasciclin domain 83 217 IPR000782 -
Cca04g00767 290 SUPERFAMILY FAS1 domain 69 218 IPR036378 -
Cca04g00767 290 MobiDBLite consensus disorder prediction 30 65 - -
Cca04g00767 290 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00767 Cca-Chr4 7670216 7671088 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00767 - - gmx:100790242 421.394