Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00761 ATGAAGAAGCAATCTCTCTTGTCCATCTCACTAGTAGTGCTACTTTCATTTTTGTATTCCACAACCACTTTAGCCCAATTATCACCAGCTTCTGCCCCTCTAAAACCAGTTCAACCTAGCCCTACCCCACCAGCTGAGGCACCTAAACAAGCATTGGTTCCCTCATTGCCACAGTCACCAAGTGATTCAACACCAGACACTGCAGCACTTGACATTGTTGGAATCCTGAGGAAGGCTAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTTAATGCACAACTCCTCACTACTAAATCTGGTGGCATCACCATTCTTGCACCCGATGACAGTGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTCTCGGATGGACAAAAACTCGAGCTCTTACAGTTCCACGTTATTTCAGACTATGTATCTAGCTCCAACTTTGATACTCTTACAAATCCCGTGAGAACACTTGCAGGAGCTAAACCTGGGAAGGTGGAACTGAATGTGATAAGCTACGGTGGGAGTGTGAACATATCAACGGGTGAGGTTAACACAACCATCACTGGCATTATATATACGGATAAACATCTTGCTATATATAAGGTGGGAAAGGTGCTTCTTCCAATGGACTTCTTTGTTGTTGCTAAGGCACCTGCAAAGGGACCCTCCTTGGCTCCACAACCTTCAAGTGATGCTGCAAAAGCGCCAAAAGCTGATAAGGACCCATTATCTGCAGATTCCTCAGATTCATCTCAAATTAATTCCACAAGCGAAAACTCTGGCACTGTGAAAATCAATGTGCATGGAAAATGGGTGGCCCTTGTTCTTGGACTAGGTCTCATGACTGTAGTCTCATCATAA 882 0.4467 MKKQSLLSISLVVLLSFLYSTTTLAQLSPASAPLKPVQPSPTPPAEAPKQALVPSLPQSPSDSTPDTAALDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFVVAKAPAKGPSLAPQPSSDAAKAPKADKDPLSADSSDSSQINSTSENSGTVKINVHGKWVALVLGLGLMTVVSS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00761 293 MobiDBLite consensus disorder prediction 31 65 - -
Cca04g00761 293 MobiDBLite consensus disorder prediction 229 266 - -
Cca04g00761 293 MobiDBLite consensus disorder prediction 34 50 - -
Cca04g00761 293 SUPERFAMILY FAS1 domain 63 216 IPR036378 -
Cca04g00761 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 291 - -
Cca04g00761 293 MobiDBLite consensus disorder prediction 252 266 - -
Cca04g00761 293 SMART fasc_3 111 216 IPR000782 -
Cca04g00761 293 ProSiteProfiles FAS1/BIgH3 domain profile. 69 213 IPR000782 -
Cca04g00761 293 Pfam Fasciclin domain 81 215 IPR000782 -
Cca04g00761 293 Gene3D FAS1 domain 51 215 IPR036378 -
Cca04g00761 293 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 5 291 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00761 Cca-Chr4 7634914 7635997 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00761 - - gmx:100790242 439.884