Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00759 ATGATGAACAACCAATCTCTCTTGTCTTTCTCACTAGCATTGCTAGTTTCATTTTTTTATTGCACCACCACTTTAGCCCAATTATCACCAGCTGTTGCACCTGTAAAACCAGTTCAACCAGCCCCTACCCCACTAGCTGAGGCTCCTAAACAACCATTGGTTCCCTCATTGCCACAATCACCAAGTGACTCAACACCCGACACTGCAGCACTTGATATTGTTGGAATCCTGAGGAAGGCTAAGTCATTCAACATCCTAATCCGCCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTCCTCACTACTAAATCTGGTGGCATCACCATTCTTGCACCCGATGACAGTGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTCTCTGATGGACAAAAACTCGAGCTCTTACAGTTCCACGTTATTTCAGACTATGTATCTAGCTCCAACTTTGATACTCTTACAAATCCTGTGAGAACACTTGCCGGAGCTAAACCTGGAAAGGTGGAACTGAATGTGATAAGCTACGGTGGAAGTGTGAACATCTCAACAGGTGAGGTTAACACAACCATCACTGGCATTATATATACGGATAAGCATCTTGCGATTTACAAGGTGGGGAAGGTACTTCTTCCTATGGACTTCTTTGCTGTGGCCAAGGCACCTGCAAAGGGACCCTCATTGGCACCACAACCTTCAGCAAAGGCTCCTAAACCTGATAAGGACCCATTGTCTCCAGATTCTTCAGAATCATCTCAGATTAATTCCACAAACGAAAACTCTAGCACTGTGAAAATCAATGTGCATGGAAAGTGGGTGGCCCTTGTTCTTGGACTAGTTCTCATGACTGTATTCTCATCATAA 876 0.4452 MMNNQSLLSFSLALLVSFFYCTTTLAQLSPAVAPVKPVQPAPTPLAEAPKQPLVPSLPQSPSDSTPDTAALDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPQPSAKAPKPDKDPLSPDSSESSQINSTNENSSTVKINVHGKWVALVLGLVLMTVFSS 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00759 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 - -
Cca04g00759 291 MobiDBLite consensus disorder prediction 43 66 - -
Cca04g00759 291 ProSiteProfiles FAS1/BIgH3 domain profile. 70 214 IPR000782 -
Cca04g00759 291 MobiDBLite consensus disorder prediction 230 264 - -
Cca04g00759 291 MobiDBLite consensus disorder prediction 250 264 - -
Cca04g00759 291 Gene3D FAS1 domain 55 216 IPR036378 -
Cca04g00759 291 SUPERFAMILY FAS1 domain 64 217 IPR036378 -
Cca04g00759 291 Pfam Fasciclin domain 82 216 IPR000782 -
Cca04g00759 291 SMART fasc_3 112 217 IPR000782 -
Cca04g00759 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 290 IPR045003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00759 Cca-Chr4 7622255 7623356 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00759 - - gmx:100776667 444.121