Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00757 ATGTTGAGGAACCAATTTGTCTTGTCTTGTTCACTAGCATTGATAGTTTCATTTTTGTACTCCACCACCACTTTTGCACAATTATCACCAGGTTCTGCCCCTCTAAAACCACCCCAACCTAGCCCTACCCCACCAGTTGAGGCTCCCAAACAAGCATTAGTTCCTTCATTGCCACAATCACCAAGTGATTCCACCCCTGACACTGCAGCAGCAGTTGACATTGTTGGAATCCTAAGGAAGGCTAAATCATTCAACATCCTAATCCGTCTCATGAAAACCACCCAATTGATCAACCAACTCAATGCACAACTACTCACTACTAAATCTGGTGGCATCACCATTCTTGCACCCGATGACAGTGCCTTCTCAGAACTCAAAGCAGGCTTCCTCAACTCTCTTTCTGATGGACAAAAACTTGAGCTCTTACAGTTCCACGTTATTTCAGACTATGTATCTAGCTCCAACTTTGATACTCTCACAAACCCAGTGAGAACGCTTGCAGGAGCTAAGCCTGGAAAGGTGGAACTGAATGTGATAAGCTACGGTGGAAGTGTGAACATCTCAACAGGTGAGGTTAACACAACCATCACTGGCATTATATATACAGATAAGCATCTTGCTATTTACAAGGTGGGGAAGGTGCTTCTTCCAATGGACTTCTTTGCAGTGGCCAAGGCACCAGCAAAGGGACCCTCATTGGCACCACAACCTTCAGCAAAGGCTCCCAAACCTGATAAGGAACCATTATCCCCAGATTCCTCAGAATCATCTCAGATTAATTCCACAAACGAAAACTCTGGCACTGCGAAAATCAATGTGCATGGAAAGTTGGTGTCCCTTGTTCTTGGACTAGTTCTTGTGATTTTTTTGTCATCATAA 879 0.4425 MLRNQFVLSCSLALIVSFLYSTTTFAQLSPGSAPLKPPQPSPTPPVEAPKQALVPSLPQSPSDSTPDTAAAVDIVGILRKAKSFNILIRLMKTTQLINQLNAQLLTTKSGGITILAPDDSAFSELKAGFLNSLSDGQKLELLQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGEVNTTITGIIYTDKHLAIYKVGKVLLPMDFFAVAKAPAKGPSLAPQPSAKAPKPDKEPLSPDSSESSQINSTNENSGTAKINVHGKLVSLVLGLVLVIFLSS 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00757 292 MobiDBLite consensus disorder prediction 251 267 - -
Cca04g00757 292 MobiDBLite consensus disorder prediction 33 51 - -
Cca04g00757 292 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Cca04g00757 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 283 IPR045003 -
Cca04g00757 292 Pfam Fasciclin domain 83 217 IPR000782 -
Cca04g00757 292 MobiDBLite consensus disorder prediction 230 267 - -
Cca04g00757 292 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 1 283 - -
Cca04g00757 292 SMART fasc_3 113 218 IPR000782 -
Cca04g00757 292 MobiDBLite consensus disorder prediction 30 65 - -
Cca04g00757 292 Gene3D FAS1 domain 55 217 IPR036378 -
Cca04g00757 292 SUPERFAMILY FAS1 domain 69 218 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00757 Cca-Chr4 7608487 7609474 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00757 - - gmx:100790242 462.225