Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00744 ATGGCCGAAGCATGTACCTCGGAGGATCACAACCATAACCATATTCCCATCGAAATTGTGAGCGACGACGAAATGGCTTTCATTGAAGCTGCACTTGCTTTCGCTTCCACTCGTTCTTTCTCTGCAAttcgttcttcttcttcttcttcttcttcGCCACCACACTTTCACTCAAACGCCTTATCCGTCACCCTCGTGTCCAATGCCAAAAGAAGGTTATCAAGTGGCAGCAGTGACATCGAGGACTTACCTGCCCACAAGAAAAAATCCAATCTTTTTGACTCCTTTCTTCGCCGCTTCAGGAAGAAACGGGGTTTGTCCGTCACTGATCTTACAGCTACGGAATGGTGCCCTAAACAAATGGAATTTTCTCTCCTTCTTGGACGGCGAAAGGTCAATCAAGCAATGAGAGCTGGCATTGCTCGCCATGCAAAGCTTGAAGAAGAGGTTATAAAACGGGTGGAAGTGAAGGTCAAATCACAAGAAGATCGTTGGGCCCTGAAGTTTCTTAATTTTATAAATGGTGTAAATCAATTATTATTTGAAGGATTGACTCGTGAACTGCCAATAATAGACTCGTGCTCGAGATACACTTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGAACCACAACGAAGAAATGGAAGGTTCACTTATTCTTCTGCCATTTATTTCATTCTGATGGATGTGGTATTGCATGCTAATGCATTTGATAGAATCATTATGGTGCTCTTACTTTTTGCAGGCTTCAGTTGA 900 0.3411 MAEACTSEDHNHNHIPIEIVSDDEMAFIEAALAFASTRSFSAIRSSSSSSSSPPHFHSNALSVTLVSNAKRRLSSGSSDIEDLPAHKKKSNLFDSFLRRFRKKRGLSVTDLTATEWCPKQMEFSLLLGRRKVNQAMRAGIARHAKLEEEVIKRVEVKVKSQEDRWALKFLNFINGVNQLLFEGLTRELPIIDSCSRYTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPQRRNGRFTYSSAIYFILMDVVLHANAFDRIIMVLLLFAGFS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00744 299 Pfam Exonuclease V - a 5' deoxyribonuclease 96 191 IPR019190 GO:0045145
Cca04g00744 299 Coils Coil 256 257 - -
Cca04g00744 299 Coils Coil 144 164 - -
Cca04g00744 299 PANTHER EXONUCLEASE V 2 191 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00744 Cca-Chr4 7457296 7461624 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00744 K17815 - gmx:100792136 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00744 04 7457296 7461624 Cca04g00744 04 7457296 7461624 ECH