Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00741 ATGGAGTGGGAGAAGACGAAGGAGTGCGCGCGGGAGTTCATGGCCGGCGTGGCGGAGATCACGGTGGCGTTCGGCAAAGGCTGCAGAGACATAGTCAACCAGAGTCTGGTCAACGACGATTCCTTCATCGTCAAAAAACTCGGAAGAGATTCCTACATTGGGAAAAAACTGAGAACATCCTGCGCTAGGCTTTTCGCCAAATTCACCTTCTTCAACCACTACTTACCCGAGGACAAGGACCCTCTCCACGCTTGGTCCGTCATTCTCTTCGTTTCGCTATTCGCCTTCTTAGCTTTATATGTGAATTTTGAGCGCGATCCGTGTGCGCCGCTTGTGaagcaactgttcgtgcatcctcctagtgctactcggatactgcttcctgatggaagatacatggcgtataaggagcaaggtgtttcatctcacagagctaggttttcggttattgctcctcatacttttctttcctccaggcttgcagGGATTCCTGGAGTTAAAGATTCGCTGCTGGAGGAGTTTGGGATTCGTTTGTTGACGTATGATCTTCCTGGCTTTGGTGAGAGCGATCCTCATCCCAAGCGGAATCTGGAAAGCTCGGCTAAAGACATGGCGTTTTTAGCGGATGCTCTTGGTGTGAACAAGTTTTGGGTTGTTGGTTACTCCACTGGTAGCATGCATGCTTGGGCTGCGCTTAGATATATTCCTGATAAGCTTGCTGGTGCTGCCATGTTTGCTCCCATGGTGAACCCATACGATCCTATAATGACGAGGGAAGAGAGAAAAAGAACCTGGAACAAATGGACCCGGAAAAGAAAATTCATGTATTTCTTAGCTCGGAGATTTCCTGGACTTCTTGCTTTCTTCTATAAGCGAAGCTTCTTGTCAGGAAAGCATGGTCAGATTGATAAGTGGCTGTCATTATCTCTGGGAAGGAGGGATAAAGCACTGATGGAAGATCCAATCTATGAGGAATTCTGGCAAAGGGACGTGGAAGAATCAATCAGGCAAAGGAATTCGAAACCCTTTGTGCAGGAAGCTGCTTTGCAGGTCACAAACTGGGGTTTCAGCCTTTCGGACCTCAAGTTGCAGAAGAGAAAACAAAGTTGGCTTAAGTCAATGTTCACCGAAACTCAGGAATATACAGGATTTCTTGGCCCTATACATATATGGCAAGGAATGGATGATAAAGTGGTTCCCCCCTCAATGACTGATTTTGTGCACCGCGTACTACCTGGAGCTGCAGTTCATAAACTCCCATATGAAGGTCATTTCACCTATATCTACTTTTGTCATGAATGCCACAGACAGATATTTACTACAATTTTCGGAACCCCACAAGGCCCACTCAGCATTTCTGTAGAAGTAGATCAAACTACCCTAGAAACCAATATTGAACAGCAAGAAGTAGTAAACGATGGTGATTATGCCAAAAACTAG 1440 0.4146 MEWEKTKECAREFMAGVAEITVAFGKGCRDIVNQSLVNDDSFIVKKLGRDSYIGKKLRTSCARLFAKFTFFNHYLPEDKDPLHAWSVILFVSLFAFLALYVNFERDPCAPLVKQLFVHPPSATRILLPDGRYMAYKEQGVSSHRARFSVIAPHTFLSSRLAGIPGVKDSLLEEFGIRLLTYDLPGFGESDPHPKRNLESSAKDMAFLADALGVNKFWVVGYSTGSMHAWAALRYIPDKLAGAAMFAPMVNPYDPIMTREERKRTWNKWTRKRKFMYFLARRFPGLLAFFYKRSFLSGKHGQIDKWLSLSLGRRDKALMEDPIYEEFWQRDVEESIRQRNSKPFVQEAALQVTNWGFSLSDLKLQKRKQSWLKSMFTETQEYTGFLGPIHIWQGMDDKVVPPSMTDFVHRVLPGAAVHKLPYEGHFTYIYFCHECHRQIFTTIFGTPQGPLSISVEVDQTTLETNIEQQEVVNDGDYAKN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00741 479 Gene3D alpha/beta hydrolase 117 432 IPR029058 -
Cca04g00741 479 SUPERFAMILY alpha/beta-Hydrolases 119 438 IPR029058 -
Cca04g00741 479 PANTHER HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN, EXPRESSED-RELATED 9 467 - -
Cca04g00741 479 Pfam alpha/beta hydrolase fold 165 428 IPR000073 -
Cca04g00741 479 PANTHER ALPHA/BETA FOLD HYDROLASE 9 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00741 Cca-Chr4 7420166 7424780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00741 174 254 Acyl Lipid Metabolism Gene Families AT4G02340 30.952 1.61e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00741 - - gmx:100790561 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00741 04 7420166 7424780 Cca04g00741 04 7420166 7424780 ECH