Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00730 ATGAAGAGGAAGAAGAGAGGAGGCGGTTACAACTTGCGCAAGAGCTTGGCGTGGGATCGAGCTTTCTTCACCGAACAAGGTGTTTTGAATGCGGTGGAGCTTTCTATGATTAGTGGCACGGTCTCTGCTAAGTCAGGGTTGAATCTGGAAGCTATCCAAGAAGAAGAGCCCGTTGGCACTTCGATAGAGTTGCAGGAAATTGAAGAGAATTTGTTTATGCATTCATCAGATGCTCTTCCCGTTAAAGATAGAAAAATTGGCTTATCTCCGAAGCCTGGTGCATTGGCTAAAGCTTCTCCGGCCCCGGTTTCCTTGGCAAAGAGGAAAGTACTTACTGTCAATGATACTGTTGGGAATAGAGCAAAACGCAATGCTTGTCCGCGGTTGCCAGTAGCTTCGTCCTCATTAAAAAGACCTGACACAAAGGCACCGAGTAAAGAATTGAAAGTCAATAGGATACCTGGTCCAAAATTAAATGTGTCTGCTACTGCAACAACTGCTAGGAGTGGAATGTTGACCTCAGGTTCCTCAAAGAGTAATCAGAATGGTCGTCCTATTCCTGCCACTAATGTGCAGAGGCATGCTGGAGTAAAAGGCCTATCAAAAAATCCTAAAATTGCTCCAAGTAACCCAAAAGTTGGCCTGGCTGACAAATGTTCAGTTACTAGATCACTTGCCAAGCCGGCTGTGAAACATTTGGATAACTCAGTTTCAGAAACACATCCACCATCCAGAATGCATCAATCAGGAACTGAAGCAAATAAGGTTTCAGAAGCTTATCTCCCACAAGGTGCTTCTGACATTGGTGAGAAAAAGCAACAGACACAGTTTCAACCAACAAAATTGTCAGGCCTACGGATGCCATCTCCCTCATTGGGATTCTTTTCTCTATCTCAGGCAAAAGCTCCCAGTTCACGTAGCCAATTGCAGAAAAGTTCTAAACCTTGCAAACCTTCTAACAGTAACATTCCTAAATTACAGAATTTAGAAACAATTTCTGTTAATGAGGCAAGACTACCGCATGCACCTGGTGTAAGGTCTGAAATTATCAAAGGAGCAGCCAAGAATTGCATTGAGGAATTAAGCCTTTTAAATGTAAAGTCAGAAGCAAGCATGCAAGTGGATAATAAGCGGATGGCTGGTGTAGAAGTGGAATATGATTCTATGGGTTCTAAAAAAGTAACAAAGCAAGAAAAGGTTGAAAGCATTCTTGAACATGTCAACAAAAAATCCAAGGAATGGGGAGAACTACATAGAAATGAGAATGATTCTAGTGTGGAGGATGTGGTATTCCCTAGACATGAAACGAAGCTTCTTTCAAAGAGTGATACCCAAGAGCAGTTGGAGAAAGAAGTTGAGCACCCTGATGTTTTGTCAAATGGGTATCGATCTGTATTTCAAGAACCACAGTCTATGCAATATCATGGCATACAGAGAACTTCAACAGTGAAAGGTAGTATTACAAATACTGTGCATAATGCCATGGGACAAGATGAAGATGAACAAATCAAACTTCTTGGTTCTGATGTTCTTACTTTAAATGAAACTTTGGTGCCACAGGAAAAGCATGAAACTTCTTATAAGCATAGTAGACTTTCTGGAGAGTTAAAGGAATACAGTAGTGTCAAGACTGCCCTTATAAATTCTGGTCTTAATGGCTTTCGTGAAACTGCTTTACCTACACAAGAAATCCACTTTAAGAATACTGAACAGGTAAATGGTAGTGGTGCTGATTTTGTTACAAGTGGAGGAGATGCACAAGTGCATTTATTGGACAGGAATCCCTCAGTCGATTGCAATGAAACCACCACTGAAAGTAATTTAGAGGCAGTTAATCAGCAGTTACCAGGGGAACAACTCAAGACTACAAGTACTAGAATTGAAGGAGAAATTAATTCAAAAGGAAATGAATCTCATGTAAACAGTTGTCAGCCAGTTCATATAATATCTTCCAAAGGTTCTCCACAGAAGTCTGTGCCAGAAATTAACTGTCCTGCTGAAAGTGAACCAAAAATAGCTAAAATTGAAGACTGCCCGTTTCCTGTAGATGATCAATCAGGTTTCATTCAGACAAGACCAGTTTTGGAAGGATGTGAAAAGGTTATTGACTCAAAAGCAATTCATGATAGTACTCAAGTGTTTGAATTGTATAGGTGGAGTAAAGATTGCTTAACTGCTTCTGCAACTGCTTGCAACACTGAGGTGGGCAATGTTTCTCAGGAAATCAGACCTTTTCATGAGAATAATCTAGAGAATCTCCACTTTTCATTCCAACAATCTCCTATGGAAAAAGCTGATTTTGATTCTAGTGAGAATGAAATGTCAACTGATAACTGCTGTATGATTTCTGAGTTGCAGTTTAGAGACAAGGGTTGTTCTACGGATGCTTCAATGCACTATGATGTTCTTCATGAAGATGAGAATTTGGTGCTAAACAATGATCACTTGATTGATCAGAGTGAATTTTCTGAAGTATCTGCAGATTTCATTTCAAACACCAAAGATTCTATTGGTAGCGGAGCTGAAAATTCCTCTGGCTGTTTACAACATACACTATTGGCTCAGTTAGTTCAAGAAGTTGACCGCACTAACAGAGAGATTGAAGAATCAGATGTGGAAGATGCACAAGTACAGTCGGCATACAACTGCAACAATTCCGAGAATGTTAATAGCGTACTACATTTGAATGGTGACTGGCTGCCCACAAATATTGCTTCTTCTGAAAAAATAAAGAAAACTAATTTATTTGAGGGTGTATTAGAAGGATGCGATATCTACACGAGTGAGCACAATACTTCCAATCGTCAAATTCAGGCTATGCCTGAAAACAAAGATGGAAATCTTGCTGTGGATGAAAGAGAAGAGCTTTTGCAAATGGATAATGCAAAAGAAGGTTCTTCTGACATACTGCCAGCAGTTGAAGTTCAACTTGATGACAAAATTATATCTTCTGAATGTGATTCTACTATACAAGTGAGCAAAGATTCTCTTACACATGCAGTTGCTTGGAAATCTGAGGAGCGTTGTGCTTTAAGTGAAAGTTCAAATTTTCCAGTTTCGGATAATCTAACCTTCAACACAATAATCCCACAGGTCTGTGAAATTAGCTCATTGAACAGTGAAACACTTTCAGATGAGTTACCTAATACCGACATGCAGCATCAATCAGAAGGAGGCATTTATTTTGCAGAAGACAGCAACAAAATAATTCCTTTGCACAAATCTGTGCCTAAAAGCCAGCAGGAAGTTCCTACAGTGAAGCCTCCACCGAATGCTGCTCCACTTTCTGATGAATGCTTAGCTGCAATTGAAGCCACTGGAGAGTTGAATCAAAATTCCCCCAATGGAGGTTGGCCAGAAACTGGTTCTGCAACTGCTTGTGACACTAAGGTTAGCGATGATGGTTCTTCTAGGGATGCTTCAATGCACCATGATGTTCAATGTGATGTCCCTGTAAACTTTGAGCAACAAACTAGCATGATTATTTATTCTAAAGCTAATGAAATGCTTTGTGAATATGAGAGCTTATTGCCAAATAGTGATCATTTGGTTGATCAGAGGGAATTTCGTGAAGTATCTGCAGACTTCATTTCAAACACAAAAAATTCTATTGGTAGTGGAGCTGAAAAACCCTCTGGCCATTTACAACATGCACTATTGGCTCAGTTTGTCCAAGATTTTGATCACAATAACAGAGGTATCGAGGAATCACATTTGGAAGATGCACAAGTATCTGCAGATTTAATTTCAAACACGAATGGTTCTATTAATAGTGGAGCTGAAAAACCCTCTGACCATTTACAACATACACTGTTGGCTGAGTTTGTCCAAGATTTTGATCACAAAAACAGAGAGATTGAGGAATCACATTTGGAAGATGCACAAGTGCAGTCATTTACTGAAAATCCAGTGGCATTCAACTGCAACAGTAAACATTGTCTTGCTGTTACTAATGATAAGTTTCCTTTGGAAGATAATAATACAAATGAAGATTTTGATCTTTCTGATTTTGAAAGGTCTAGTGCTGTTGTTGTAGATTCCCAGAATGTTGATAACATACTGCAGTCAGATCTTGATTGGCTGCCCACAAATATTACTTCTTCGGAAGAAATCAAGAAACCAAATTTATTTGAGGGTGCATTAGAAGGACGTGATATCCATACAAGTGAGCACAATGCTTCCAATCATCATATTCAGGCTATGCCTGAAAACAAAGATGGAAATCTTGACGTGGATGAAAGGGCAGAGCTTTTGCAAATGGATGGTGCAAAAAAAGGTTCAGACATATTGTCAGTAGTTGAAGTTCAACTGAATGATAAAGTTGCATCTTCTGAAGGTGATTCTTCTTTAGAAGTAAGCAAAGACTCCCTTACAGAGGTAGTTGCTTGGAAATCCGATGAGCATTGTTCTTTAAGTGAAAGTTCAGGATTACAAGCTTTAGATAATCTAACCATCAACACAAGAATCCCACAGGTCTGTGAAGTTAGTTCATTGAACAGTACAAGATCTTCAGATGAAGTTGAAACTAATATCTTTGAGGAAGATGGGTTTCCTAATTCCGACATGAAGCTCCAGTCAGGAGACATTTTTTCTGCAGAAGACAACAGCAAAATAACTCATTTGCAGAACTCTCTGACTAAAATCAAGCAGGAAGTTCCTACAGTGAAGCCTCCACCAAATGTTGCTCCTTTTTCTGACGAATGGTTAGCTGCAATTGAAGCCGCTGGAGAGGAGATTTTAACGATAAAAAGCGGTGCTGTGCAAAATTCTCCCCCTGACAAGCCCCAGCATGAACCAAGTCCTTGGTCCCCGGTGAGACGAAAGAATCAATCGATTGGACCCTTTGATTGTACGAAACACAATATCCAGCATTCCAGTTGA 4881 0.3968 MKRKKRGGGYNLRKSLAWDRAFFTEQGVLNAVELSMISGTVSAKSGLNLEAIQEEEPVGTSIELQEIEENLFMHSSDALPVKDRKIGLSPKPGALAKASPAPVSLAKRKVLTVNDTVGNRAKRNACPRLPVASSSLKRPDTKAPSKELKVNRIPGPKLNVSATATTARSGMLTSGSSKSNQNGRPIPATNVQRHAGVKGLSKNPKIAPSNPKVGLADKCSVTRSLAKPAVKHLDNSVSETHPPSRMHQSGTEANKVSEAYLPQGASDIGEKKQQTQFQPTKLSGLRMPSPSLGFFSLSQAKAPSSRSQLQKSSKPCKPSNSNIPKLQNLETISVNEARLPHAPGVRSEIIKGAAKNCIEELSLLNVKSEASMQVDNKRMAGVEVEYDSMGSKKVTKQEKVESILEHVNKKSKEWGELHRNENDSSVEDVVFPRHETKLLSKSDTQEQLEKEVEHPDVLSNGYRSVFQEPQSMQYHGIQRTSTVKGSITNTVHNAMGQDEDEQIKLLGSDVLTLNETLVPQEKHETSYKHSRLSGELKEYSSVKTALINSGLNGFRETALPTQEIHFKNTEQVNGSGADFVTSGGDAQVHLLDRNPSVDCNETTTESNLEAVNQQLPGEQLKTTSTRIEGEINSKGNESHVNSCQPVHIISSKGSPQKSVPEINCPAESEPKIAKIEDCPFPVDDQSGFIQTRPVLEGCEKVIDSKAIHDSTQVFELYRWSKDCLTASATACNTEVGNVSQEIRPFHENNLENLHFSFQQSPMEKADFDSSENEMSTDNCCMISELQFRDKGCSTDASMHYDVLHEDENLVLNNDHLIDQSEFSEVSADFISNTKDSIGSGAENSSGCLQHTLLAQLVQEVDRTNREIEESDVEDAQVQSAYNCNNSENVNSVLHLNGDWLPTNIASSEKIKKTNLFEGVLEGCDIYTSEHNTSNRQIQAMPENKDGNLAVDEREELLQMDNAKEGSSDILPAVEVQLDDKIISSECDSTIQVSKDSLTHAVAWKSEERCALSESSNFPVSDNLTFNTIIPQVCEISSLNSETLSDELPNTDMQHQSEGGIYFAEDSNKIIPLHKSVPKSQQEVPTVKPPPNAAPLSDECLAAIEATGELNQNSPNGGWPETGSATACDTKVSDDGSSRDASMHHDVQCDVPVNFEQQTSMIIYSKANEMLCEYESLLPNSDHLVDQREFREVSADFISNTKNSIGSGAEKPSGHLQHALLAQFVQDFDHNNRGIEESHLEDAQVSADLISNTNGSINSGAEKPSDHLQHTLLAEFVQDFDHKNREIEESHLEDAQVQSFTENPVAFNCNSKHCLAVTNDKFPLEDNNTNEDFDLSDFERSSAVVVDSQNVDNILQSDLDWLPTNITSSEEIKKPNLFEGALEGRDIHTSEHNASNHHIQAMPENKDGNLDVDERAELLQMDGAKKGSDILSVVEVQLNDKVASSEGDSSLEVSKDSLTEVVAWKSDEHCSLSESSGLQALDNLTINTRIPQVCEVSSLNSTRSSDEVETNIFEEDGFPNSDMKLQSGDIFSAEDNSKITHLQNSLTKIKQEVPTVKPPPNVAPFSDEWLAAIEAAGEEILTIKSGAVQNSPPDKPQHEPSPWSPVRRKNQSIGPFDCTKHNIQHSS 1626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00730 1626 MobiDBLite consensus disorder prediction 232 252 - -
Cca04g00730 1626 PANTHER - 1 181 - -
Cca04g00730 1626 PANTHER - 882 1108 - -
Cca04g00730 1626 MobiDBLite consensus disorder prediction 161 188 - -
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 89 1028 IPR045882 GO:0008017
Cca04g00730 1626 MobiDBLite consensus disorder prediction 268 285 - -
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 882 1108 IPR045882 GO:0008017
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 1 181 IPR045882 GO:0008017
Cca04g00730 1626 MobiDBLite consensus disorder prediction 1109 1142 - -
Cca04g00730 1626 MobiDBLite consensus disorder prediction 292 324 - -
Cca04g00730 1626 PANTHER - 89 1028 - -
Cca04g00730 1626 MobiDBLite consensus disorder prediction 237 252 - -
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 1108 1239 IPR045882 GO:0008017
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 1347 1626 IPR045882 GO:0008017
Cca04g00730 1626 MobiDBLite consensus disorder prediction 1584 1626 - -
Cca04g00730 1626 MobiDBLite consensus disorder prediction 265 324 - -
Cca04g00730 1626 PANTHER - 1240 1352 - -
Cca04g00730 1626 PANTHER - 1108 1239 - -
Cca04g00730 1626 PANTHER - 1347 1626 - -
Cca04g00730 1626 PANTHER OS05G0121800 PROTEIN 1240 1352 IPR045882 GO:0008017
Cca04g00730 1626 MobiDBLite consensus disorder prediction 1109 1131 - -
Cca04g00730 1626 MobiDBLite consensus disorder prediction 161 214 - -
Cca04g00730 1626 Coils Coil 853 873 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00730 - - gmx:102669351 1843.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00730 04 7269033 7277285 Cca04g00730 04 7269033 7277285 ECH