Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00712 ATGGGAGGAGAGAGCGCTCAGAAATCCACCCGAGAGGTGTCAGCGATGATAAAACAAGGTTTCATACCCGACACGACCCTCTCTTTCTCACCTTCTAGAACCTTCTCTCCGCCACCTTCCACCACTCGCCCGACTCACACTCACACGCAAACCCTCTTCGACATGATGTCCGAGGACAACAAATTCTCCGACCACAAGCGCCGCCAAATGCACGATCGCCTCGCCGGGCTGCTCGCCGAGCCCGCCCTGCGCGGCGGCGACGTCAGGGTCGCGGTGGTCGGAAGGGACGGCCTGAGGGTCTCCATGGAGGCGCGCAAGACCGTCCTCGCCGACAAGAGCCGCTTCTTCGCCGAGAAGTTTCGCTGCGACGGCGCCTTCTCCCACTCCGTCGAGATCAGCGACTGCGACGACGTCCAAGTCTACGTTGAGGCTGTCGTTTTGATGCACTGCCATGATCTCAAGCTGCGCTTGCGCCAAATGTGCCAAGGGGTTCCTAAAATTTTGAGCTTGCTCAAGGTGTCAGCGGCTATCATGTTTGACTTGGGGGTTTTATCGTGCCTTGAATATTTGGAAACTATTCCATGGACTGAGGATGAACAGGAGGAAGTCATGTCTCAGCTAGAACATTTGCAGCTTCATGACCCTGCATCCGAAGTTCTTCTTAGAGTATCATCTGATCCATCTACTGCTGATAGTGCTGATGACATCTTCTTGAACCTGCTAAGTGGTGTTCTACAAGCGAAAGACGACAAGGCTCGCAGGGAAATGAAGGCTCTGCTGTCTAGGTTGTTTAAAGAGAATGCATCTAATGATAGCAGCATACTTGATGTGTCTAAAGACACACTCTATCATCTTTGCCACAAGTGCATCAGTTCTCTTCTCCTATGCCTGTCCGAAGCGACCCTGGACGGCGATGAGAGGCCAGATCGGGCGGTTATAATGGCCGACATAACTCGCGAAGCTGACAACATTCAGTGGATTGTTGACATTTTGATTGGCAAAAAGATGGGTGATGAATTTGTGAAAATATGGGCAGACCAGAAAGAGCTTGCTGCACTTCATTCCAAGGTTCCAACGGTTTACCGGCACGAGATCAGTAGAATCACAGCGCAACTATGCATTGGGATTGGAAGGGGACACATACTGGTACCAAAAGAAATTCGATTTTCCTTGTTGTCGACATGGCTAGAAGCTCTATATGATGATTTTGGATGGATGAGGAGAGCTTCAAGAGCTGTTGATAAAAAATTGGTTGAGGATGGACTAAGCCAAACTATTTTGACACTTCCTTTACTCCAACAGCAAACTGTGTTGCTCAATTGGTTTGATAGATTTCTTAATAAAGGAGATGACTGTCCGAATATTCAGAAGGCTTTTGAGATTTGGTGGAGAAGGGCCTTCATCAGACAATATTCAGCTGAGCCTGATAATTCCCAGTTGCAAATAGCTCTCTCTGATTACCGAAGCTGA 1470 0.4925 MGGESAQKSTREVSAMIKQGFIPDTTLSFSPSRTFSPPPSTTRPTHTHTQTLFDMMSEDNKFSDHKRRQMHDRLAGLLAEPALRGGDVRVAVVGRDGLRVSMEARKTVLADKSRFFAEKFRCDGAFSHSVEISDCDDVQVYVEAVVLMHCHDLKLRLRQMCQGVPKILSLLKVSAAIMFDLGVLSCLEYLETIPWTEDEQEEVMSQLEHLQLHDPASEVLLRVSSDPSTADSADDIFLNLLSGVLQAKDDKARREMKALLSRLFKENASNDSSILDVSKDTLYHLCHKCISSLLLCLSEATLDGDERPDRAVIMADITREADNIQWIVDILIGKKMGDEFVKIWADQKELAALHSKVPTVYRHEISRITAQLCIGIGRGHILVPKEIRFSLLSTWLEALYDDFGWMRRASRAVDKKLVEDGLSQTILTLPLLQQQTVLLNWFDRFLNKGDDCPNIQKAFEIWWRRAFIRQYSAEPDNSQLQIALSDYRS 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00712 489 MobiDBLite consensus disorder prediction 24 47 - -
Cca04g00712 489 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 11 488 IPR038920 -
Cca04g00712 489 PANTHER BTB/POZ DOMAIN PLANT PROTEIN 11 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00712 Cca-Chr4 7036443 7038724 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00712 - - gmx:100785263 764.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00712 04 7036443 7038724 Cca04g00712 04 7036443 7038724 ECH