Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00711 ATGGAGGCTCAGAATAGAAGAGGAGGATTGGTGCCGCTGTCGCCGTCGCAGACGGCGCGCTCCGGCGACAAGCCGGCGCGAGATCTGCGATCTGCGGATTCTAATTCGAGCGGTCACAGCAAGTTTGATAAGGACAAAGGCGTCAATGTGCAAGTGCTTGTTCGGTGCAGGCCGTTAGGTGAAGATGAAGCACGGTTGCATACGCCGATCGTGATTTCGTGTAACGAAGGTAGAAGAGAGGTTTCTGCTGTGCAGAGTATAGCTAACAAACAGATCGATAGAACCTTCGCATTTGACAAGGTTTTTGGTCCAAATTCAAAGCAGAAAGAACTGTATGAGCTGGCAGTATCTCCTATTGTGAATGAAGTGCTTGAAGGCTATAACTGCACCATTTTTGCGTATGGTCAAACAGGGACAGGGAAGACATACACAATGGAAGGAGGTGCAAGAAAGAAGAATGGAGAGTTTCCGAGTGATGCTGGTGTCATCCCAAGAGCTGTGAAACAGATTTTTGATATATTAGAAACTCAGAATGCTGAGTATAGCATGAAAGTAACGTTTCTAGAGCTTTACAATGAGGAGATAACAGATCTTTTGGCCCCTGAGGAGACTTTAAAATTTGTGGATGACAAATCTAAGAAACCTATTGCTCTAATGGAGGATGGAAAGGGGGGTGTGTTTGTCAGAGGTTTAGAAGAAGAGATTGTTTGCACTGCAAATGAAATTTATAAGATATTGGAAAAGGGGTCTGCAAAAAGGCGAACAGCCGAGACTCTTCTTAATAAACAAAGCAGTCGTTCCCATTCCATATTTTCTATCACTATTCACATTAAGGAGTGTACTCCAGAAGGTGAAGAAATGATTAAATGTGGGAAGCTAAATCTTGTGGACCTCGCAGGCTCTGAAAACATTTCACGTTCCGGTGCAAGAGAGGGTAGAGCAAGGGAAGCTGGGGAGATAAATAAAAGCTTGCTTACTCTAGGTCGAGTGATTAATGCTCTAGTCGAGCATTCAGGTCATGTTCCTTATAGGGATAGCAAATTAACAAGGCTGTTAAGGGATTCCTTAGGCGGTAAAACCAAGACATGCATCATTGCTACAATATCACCTTCTATTCACTGTCTGGAAGAAACTCTTAATACCTTGGATTATGCACACCGTGCCAAAAATATCAAGAACAAACCAGAGATCAATCAGAAGATGGTGAAATCTGCACTCATTAAGGATCTGTATTCTGAAATTGACAGACTGAAGCAAGAGGTGTATGCTGCAAGAGAGAAGAATGGAATTTATATACCACGTGATCGTTATCTTCATGAAGAAGCGGAGAAGAAGGCCATGGTTGAAAAGATAGAGCGCATGGAACTTGAAGCAGATTCTAAGGACAAGCAATTGGTGGAACTTCAAGAACTCTACAATTGTCAGCAACTTTTGACTGCAGAGTTAAGTGATAAACTTGAAAAAACTAAGAGAAGTCTTGAAGAAACTGAGCAGTCATTATTTGATCTTGAGGAAAAGCACACACAAGCAAATGCAACAATTAAGGAAAAGGAATTTCTAATATCAAATCTTCTGAAATCTGAAAAAGCACTTGTGGAGCATGCAATTGAGCTACGAGCTGATCTTGAGAATGCTGCATCCGATGTGTCAAAACTGTTTTCTACAATTGAGCGGAAGGATAAAATTGACGAAGGAAACAGAATACTTATCCAGAAATTCCAGTCTCAGTTAGCTCAACAGCTAGAAGAATTGCACAAGACGGTTGCAGCATCTGTAATGCAACAAGAGCAGCAACTGAAGGAAATGGAAGAAGATATGCACTCTTTCGTATCAACAAAGGCAGAGGCTATTGAAGAGCTTAAAGTGCGGGTGCGGAAATTAAAAAACATGTATGGTTCTGGCATTAAAGCTTTGAACAGTTTAGCTGAGGAGCTTAAAGGAAATAATCAGTTAACTTTTGAAGAGTTGAATTCTGAAGTAGCCAAGCATTCATATGCCTTGGATGATCTTTTTAAAGGAATCGCATTAGAAGCTGATTCATTACTAAATGATCTTCAAAGTAGTCTCCAAAAGCAAGAGGTCAAGTTAACTGCTTATGCTCGACAACAGGAAAAGGCACATGCCAGAGCAGCGGAGAACACACGTTCAGTGTCTAAAATAACTGTGAACTTCTTTGAGACATTACACATGCATGCGTCCAATTTGATCCAAATTGTGGAAGAATCACAGTTTACCAATGATCAGAAATTGTACGAACTTCAAAAGAAGTTTGAGGAGTGTACTGCACATGAAGAAAAACAACTATTGGAGAAAGTGGCAGAAATGCTTGCTAGCTCTAGTGCTAGAAAGAAACAACTGGTCCAAATGGCAGTTAATGATCTTCGGGAGACTGCAAACACTAAAATCAATAGGCTGAGGCAAGAAACATTAACCATGCAAGAGTCCACTTCTTCTGTTAAAGCAGAATGGAAACTTCACATGGATAAAACGGAGTCCAACTATCATGAGGATACTTGTGCAGTAGAATCTGGAAAGAATGACCTTGTGGAGGTTCTTCAGTACTGCCGCAAGAAGGCAGAAGTAGGTGCACAACAATGGATAAATGCTCAAGAGTCCATGCTTAGCCTAGACAAGAGAAATGCTGCTTCTGTGGATACTATTATTCGGGGAGGAATGGAAGCTAATCATCTCCTTCGAGCCCGATTCTCAAGTGCTGCATCAACTACACTTGAAGATGCTGAAATAGCAAACAAGGATATTAACTCATCCATTGAATATTCATTGCAACTTGATCATGACGCTTGTGGGAATCTAAACTCTATGATTAACCCATGCTGTGGTGACTTGAGAGAATTGAAGGGCGGTCACTTCCACAGAATTGTAGAGATAACCGAAAATGCGGGGAAATGTCTTCTCAGTGAATACGCGGTAGATGAGCCATCTTGTTCAACACCCAGAAAGAGAACCTTCAATTTACCGAGTGTTTCATCCATAGAAGAACTAAGAACCCCATCATTTGAAGAACTATTGAAATCATTCTGGGATGCTAAATCTCCAAAACATGCAAATGGTGATGTTAGATACATTGGGGCATATGAAGCTGCTCAATCCGTAAGAGATTCCAGACTTCCTCTTATAGCAATTAACTAG 3150 0.4121 MEAQNRRGGLVPLSPSQTARSGDKPARDLRSADSNSSGHSKFDKDKGVNVQVLVRCRPLGEDEARLHTPIVISCNEGRREVSAVQSIANKQIDRTFAFDKVFGPNSKQKELYELAVSPIVNEVLEGYNCTIFAYGQTGTGKTYTMEGGARKKNGEFPSDAGVIPRAVKQIFDILETQNAEYSMKVTFLELYNEEITDLLAPEETLKFVDDKSKKPIALMEDGKGGVFVRGLEEEIVCTANEIYKILEKGSAKRRTAETLLNKQSSRSHSIFSITIHIKECTPEGEEMIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHSGHVPYRDSKLTRLLRDSLGGKTKTCIIATISPSIHCLEETLNTLDYAHRAKNIKNKPEINQKMVKSALIKDLYSEIDRLKQEVYAAREKNGIYIPRDRYLHEEAEKKAMVEKIERMELEADSKDKQLVELQELYNCQQLLTAELSDKLEKTKRSLEETEQSLFDLEEKHTQANATIKEKEFLISNLLKSEKALVEHAIELRADLENAASDVSKLFSTIERKDKIDEGNRILIQKFQSQLAQQLEELHKTVAASVMQQEQQLKEMEEDMHSFVSTKAEAIEELKVRVRKLKNMYGSGIKALNSLAEELKGNNQLTFEELNSEVAKHSYALDDLFKGIALEADSLLNDLQSSLQKQEVKLTAYARQQEKAHARAAENTRSVSKITVNFFETLHMHASNLIQIVEESQFTNDQKLYELQKKFEECTAHEEKQLLEKVAEMLASSSARKKQLVQMAVNDLRETANTKINRLRQETLTMQESTSSVKAEWKLHMDKTESNYHEDTCAVESGKNDLVEVLQYCRKKAEVGAQQWINAQESMLSLDKRNAASVDTIIRGGMEANHLLRARFSSAASTTLEDAEIANKDINSSIEYSLQLDHDACGNLNSMINPCCGDLRELKGGHFHRIVEITENAGKCLLSEYAVDEPSCSTPRKRTFNLPSVSSIEELRTPSFEELLKSFWDAKSPKHANGDVRYIGAYEAAQSVRDSRLPLIAIN 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00711 1049 Coils Coil 407 427 - -
Cca04g00711 1049 PANTHER KINESIN-LIKE PROTEIN KIF11 1 1049 - -
Cca04g00711 1049 Coils Coil 437 471 - -
Cca04g00711 1049 ProSiteProfiles Kinesin motor domain profile. 49 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 Coils Coil 479 513 - -
Cca04g00711 1049 MobiDBLite consensus disorder prediction 1 43 - -
Cca04g00711 1049 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 431 IPR027417 -
Cca04g00711 1049 Coils Coil 585 630 - -
Cca04g00711 1049 CDD KISc_BimC_Eg5 47 400 - -
Cca04g00711 1049 PANTHER KINESIN-LIKE PROTEIN KIN-5D 1 1049 - -
Cca04g00711 1049 SMART kinesin_4 47 399 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 ProSitePatterns Kinesin motor domain signature. 291 302 IPR019821 GO:0003777|GO:0005524|GO:0007018
Cca04g00711 1049 Pfam Kinesin motor domain 55 391 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 Gene3D Kinesin motor domain 40 423 IPR036961 -
Cca04g00711 1049 PRINTS Kinesin heavy chain signature 126 147 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 PRINTS Kinesin heavy chain signature 258 275 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 PRINTS Kinesin heavy chain signature 292 310 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 PRINTS Kinesin heavy chain signature 341 362 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Cca04g00711 1049 Coils Coil 682 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00711 Cca-Chr4 7028318 7034091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00711 49 454 Miscellaneous Gene Families AT5G06670 36.534 2.33e-67 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00711 K10398 - gmx:100784725 1887.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00711 04 7028318 7034091 Cca04g00711 04 7028318 7034091 ECH
Cca10g00471 10 4842106 4848547 Cca04g00711 04 7028318 7034091 PCT