Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00697 ATGAAAGGAATTGATTTGTTCTGTGCTTCCTCTGCTTCCACAGCAGTAACTTCTAGAATGCACCATCGTTCTATGGTACACAGAAGAACCAAAAGCTACGACCATGAAAGAAGGAAAAGCCAAGTTCATGTCCCTTGTTCATCCCAATTGCCCATCAACCCAAAGCCTTACTTCGAAAAGCACAGAAAGAGTTCAGCAGATAAGCATAACAGTGACATGCGTAGAAAAAGTTCTGTTGAAGTTAACGACCTATATACTCATCATGCTAGTGTTGATGGTTCATCCACAAGATATCTCCTTGGTGATGCTCCATTCATTGAGTGGGTATCTGAATCTAATAAAATCGCAGCAATGGCTCCTTCTCAGCGTGATGTCAAACACAATCCTATAGTTCGGTCCTCTTCTTCAACTCGCTCCAAGGACCAGGTTGTGGTTTTGAGGGTGTCGTTGCACTGCAAGGCTTGCGAAGGAAAAGTTAGAAAACATATTTCAAAAATGGAAGGAGTGACATCATTTAGCATAGACATGGAGACAAAGAAAGTGACAATCATTGGAGACGTGACACCACTAGGAGTACTTGCGAGTGTATCCAAGGTGAAGAATGCACAGCTATGGCCATCTCCTACATCATCATCTTCGAGGCCAACGTCTCCATGGTCAACATAA 666 0.4294 MKGIDLFCASSASTAVTSRMHHRSMVHRRTKSYDHERRKSQVHVPCSSQLPINPKPYFEKHRKSSADKHNSDMRRKSSVEVNDLYTHHASVDGSSTRYLLGDAPFIEWVSESNKIAAMAPSQRDVKHNPIVRSSSSTRSKDQVVVLRVSLHCKACEGKVRKHISKMEGVTSFSIDMETKKVTIIGDVTPLGVLASVSKVKNAQLWPSPTSSSSRPTSPWST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00697 221 PANTHER OS08G0405700 PROTEIN 1 217 IPR044526 -
Cca04g00697 221 Pfam Heavy-metal-associated domain 146 192 IPR006121 GO:0046872
Cca04g00697 221 Gene3D - 139 203 - -
Cca04g00697 221 MobiDBLite consensus disorder prediction 19 76 - -
Cca04g00697 221 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 217 - -
Cca04g00697 221 SUPERFAMILY HMA, heavy metal-associated domain 142 199 IPR036163 GO:0046872
Cca04g00697 221 ProSiteProfiles Heavy-metal-associated domain profile. 142 202 IPR006121 GO:0046872
Cca04g00697 221 CDD HMA 145 198 IPR006121 GO:0046872
Cca04g00697 221 MobiDBLite consensus disorder prediction 56 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00697 Cca-Chr4 6851930 6853556 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00697 - - gmx:100807544 332.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00697 04 6851930 6853556 Cca04g00697 04 6851930 6853556 ECH