Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00683 ATGTCTCGTAATCGCATCTCCACACTCTATCTTCTCGCTTACAACTCCTTTCAGGCCATTGGATGGACAATTTCCCTAATTAACATTCTCCGCAATCTTCTCGCCACTGCCTCCGTCACCGGAACCTACGCCGCCGCCGGCAACTTAATCTGTTTTCTGCAATGCGCTGCGTTCTTGGAAGTGATACACGGAGCCATTGGCATTGTGCCCAGCGGGGCGTTGCTTCCTCTTATGCAATGGGGAGGAAAGACACACTTTGTGCTCGCCATTGTTCGGAAACTCGATGAGCTCCAGGAATTACCTTCAGTTTTTATCACTTTTCTTGCATGGAGCATGGGTGAGGTCATCAGATATTCACATTATGCTTTTAGTTGTTTGGGAAATTGTCCTTCGTGGATGACCTATCTCAGGTACACTGCGTTTATTGTGCTGTATCCTTTGGGAGTGGGTCCTGGTGAAATATGGATTATGTACCAGGCGCTTCCAATTATAAAGAAGAAAAATCTCTATGCAGATTCCTTTTCAGGCCTCCCATTTAGTTATTATGATTTCCTTAAGGTTGTACTTACAGTTTATCCATTCCTCTGGTTCAAACTTTACTTGCATATGTTCAAGCAACGACGTACAAAACTTCATAAACGCAATGAAAAGAAAAAGGCGTGA 663 0.4419 MSRNRISTLYLLAYNSFQAIGWTISLINILRNLLATASVTGTYAAAGNLICFLQCAAFLEVIHGAIGIVPSGALLPLMQWGGKTHFVLAIVRKLDELQELPSVFITFLAWSMGEVIRYSHYAFSCLGNCPSWMTYLRYTAFIVLYPLGVGPGEIWIMYQALPIIKKKNLYADSFSGLPFSYYDFLKVVLTVYPFLWFKLYLHMFKQRRTKLHKRNEKKKA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00683 220 PANTHER VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASE 6 218 - -
Cca04g00683 220 PANTHER PTPLA DOMAIN PROTEIN 6 218 IPR007482 -
Cca04g00683 220 Pfam Protein tyrosine phosphatase-like protein, PTPLA 54 212 IPR007482 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00683 Cca-Chr4 6694095 6698432 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00683 K10703 - gmx:100527607 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00683 04 6694095 6698432 Cca04g00683 04 6694095 6698432 ECH