Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00664 ATGGCAGCGAATTCTTCTAATGGAGATAACCATTCAAAGCAACCTCCCATGCCATCTCCATTGCGTTTCTCCAAATTCTTTCAGTCTAATATGAGAATTCTGATTACGGGAGGAGCTGGATTCATTGGTTCTCACCTAGTTGATAGATTGATGGAAAATGAAAAAAATGAGGTCATTGTTGCTGATAACTATTTCACCGGATCAAAGGACAACCTCAAGAAATGGATTGGTCATCCAAGATTCGAGCTTATCCGCCATGATGTCACCGAAACTTTGATGATTGAGGTTGATCAGATCTACCATCTTGCATGCCCCGCGTCTCCTATTTTCTACAAATATAATCCTGTGAAGACAATAAAGACAAATGTGATTGGCACACTGAACATGCTTGGGCTTGCAAAGCGAGTTGGGGCAAGGATTTTACTTACATCAACATCAGAGGTATATGGGGATCCTCTTGAGCATCCCCAACCTGAAAGCTATTGGGGCAATGTGAACCCTATTGGAGTTCGTAGTTGCTATGATGAGGGGAAGCGTGTTGCTGAGACTTTGATGTTTGATTATCATAGGCAGCATGGAATAGAAATACGTGTTGCAAGAATCTTTAACACATATGGTCCACGCATGAATATTGATGATGGACGTGTTGTCAGCAACTTCATTGCTCAAGCTCTTCGTGGTGAACCCTTGACGGTCCAGTCTCCAGGAACACAAACTCGCAGTTTCTGCTTTGTCTCTGATTTGGTTGATGGCCTTATCCGTCTCATGGACGGGTCGGACACTGGGCCAATCAACCTTGGAAACCCAGGTGAATTTACAATGCTGGAACTTGCTGAGACGGTGAAGGAGCTTATTAATCCAAATGTGGAGATTAAGACAGTGGATAACACTCCTGATGATCCCCGACAGAGAAAGCCTGACATAACAAAGGCAAAAGAATTGCTTGGCTGGGAACCAAAGGTTAAGCTGCGAGATGGTCTTCCTCTTATGGAAGAGGATTTCCGTCTGAGGCTTGGGGTTCCCAAGAACAACTAA 1035 0.4396 MAANSSNGDNHSKQPPMPSPLRFSKFFQSNMRILITGGAGFIGSHLVDRLMENEKNEVIVADNYFTGSKDNLKKWIGHPRFELIRHDVTETLMIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLEHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRVARIFNTYGPRMNIDDGRVVSNFIAQALRGEPLTVQSPGTQTRSFCFVSDLVDGLIRLMDGSDTGPINLGNPGEFTMLELAETVKELINPNVEIKTVDNTPDDPRQRKPDITKAKELLGWEPKVKLRDGLPLMEEDFRLRLGVPKNN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00664 344 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 335 IPR036291 -
Cca04g00664 344 CDD UGD_SDR_e 31 335 - -
Cca04g00664 344 Pfam GDP-mannose 4,6 dehydratase 34 328 IPR016040 -
Cca04g00664 344 Gene3D - 28 154 - -
Cca04g00664 344 Gene3D - 155 338 - -
Cca04g00664 344 PANTHER UDP-GLUCURONATE DECARBOXYLASE-RELATED 1 344 - -
Cca04g00664 344 PANTHER UDP-GLUCURONIC ACID DECARBOXYLASE-RELATED 1 344 IPR044516 GO:0042732|GO:0048040|GO:0070403
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00664 Cca-Chr4 6539900 6544246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00664 28 327 Miscellaneous Gene Families AT1G02000 23.284 6.33e-17 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00664 K08678 - gmx:100790835 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00664 04 6539900 6544246 Cca04g00664 04 6539900 6544246 ECH