Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00640 ATGGACAAGAGCATGTTAGCGGATTTGGACTCGCTTCCCGAGGCAGATAAGCAACGAATGTCTGCCATGATCGATCAGCTCCAAATCCGTGACAGTTTGAGAATGTATAATTCACTGGTTGAGAGGTGCTTTAATGATTGTGTGGACACGTTTAAGCATAAATCTCTGCAAAAGCAAGAGGAAACCTGTGTTCGAAGATGTGCAGAGAAGTTTCTGAAGCACTCTATGCGGGTTGGCATGAGGTTTGCGGAGCTCAACCAAGGAGCTGCAACACAAGATTGA 282 0.4574 MDKSMLADLDSLPEADKQRMSAMIDQLQIRDSLRMYNSLVERCFNDCVDTFKHKSLQKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATQD 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00640 93 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9B 1 93 - -
Cca04g00640 93 SUPERFAMILY Tim10-like 28 89 IPR035427 -
Cca04g00640 93 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9 1 93 - -
Cca04g00640 93 Pfam Tim10/DDP family zinc finger 24 84 IPR004217 -
Cca04g00640 93 Gene3D Mitochondrial import inner membrane translocase subunit tim13 like domains 7 92 IPR035427 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00640 Cca-Chr4 6320686 6322391 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00640 K17777 - gmx:100500613 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00640 04 6320686 6322391 Cca04g00640 04 6320686 6322391 ECH