Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00585 ATGGAAACTCAAATTAGGAACCGTTTGGTTCTAATACCACCACCGTTTCAGGGTCACATAACTCCAATGCTTCAACTAGCCACCATTCTTCATTCCAAAGGGTTCTCCATCACCATAGCACATGACAATTTCAATTCTCCCAATCCTTCTAATCACCCTAACTTTAGTTTCCTACCCTTGTTCTATGGTTTATCCGAAACCCAAATCTCATCCAAGAACTTTGTTGACATTACTGCTACCTTGAATGCCAAGTGTGTATCTCCACTTAAAGAGTTATTAGTTGATCAGATTGAGAAAGCAAATATGAACCATGAAAAGATTGCTTGCGTTATCTACGATGGATTAATGTATTCCATCGAATCTGTGGCCAGAGAACTAAAACTAGCCAGCATAATCCTCAGAGTCACCTGTGCTACTAATTTGCTCACTTATCATGCGGTTGTTCAACGCCAAAGCACAGGTTGCCTTCCCTTGCAAGCTAATTGTATGTCGTTGGACATGGTGCCAGAACTTGAACCACTTGGGTTCAAAGACCTACCAATGTTAAACTCGCATGTTATGCAGCAGCAAATAGCCAAAACGCTTGCAGTTAGACCTTCTTTGGGTGTTATCTACAACACAGTGAATTGCCTCGAAGGGAAATCCTTGCATCGGTTACATGAGTTGTACAAAGTGAATGTCTTCCCCATAGGCCCTTTACACATGATTGCCGAAGATTCCTCAAGTAGTAGCTGCGTGGAAGAAGATTATAGCTGCATAGGTTGGCTCAACAACCAAGCAACAAAATCTGTGTTGTATGTGAGTTTGGGAAGCATAGCTAGTTGGGATGAGAAAGAGTTAACTGAAGTGGCATGGGGGTTAGCCAATAGCAAACAAAAATTTCTTTGGGTCATTAGGCCTGGGACAATTAATGATGTTTCGGAGTGGCTAGAATCATTGCCTAAAGAGGTTAAAGTGGCAATAGAAGAAAGGGGTTGCATTGTGAAATGGGCACCCCAGAGAGAGGTTTTGGCACACCAAGGTGTGGGAGGGTTTTGGAGCCATTGTGGTTGGAATTCCACTTTGGAGAGTTTGTGTGAAGGAGTTCCGATTATGTGCCAACCTCATTTTGGGGATCAAGGGGTGAATGCTAGATTGTTGAGCCGTGTGTGGAAAGTGGGGCTAGAGTGGTCCAATGTCATAGAAAGGAATGAAGTAGAAAGGGCAGTGAGAAGACTGATGGTGAATGAAGAAGGGAAGGAGATGGCACAGAGAGCATTCAAGTTGAAGAATGAGATTAAGTTGGCTGTCAAAGCTGGTTCCTCCTATGATGCCTTGAATGGAATGGTAGACAGTATCTTATCGGTGAATCTCTAA 1356 0.4307 METQIRNRLVLIPPPFQGHITPMLQLATILHSKGFSITIAHDNFNSPNPSNHPNFSFLPLFYGLSETQISSKNFVDITATLNAKCVSPLKELLVDQIEKANMNHEKIACVIYDGLMYSIESVARELKLASIILRVTCATNLLTYHAVVQRQSTGCLPLQANCMSLDMVPELEPLGFKDLPMLNSHVMQQQIAKTLAVRPSLGVIYNTVNCLEGKSLHRLHELYKVNVFPIGPLHMIAEDSSSSSCVEEDYSCIGWLNNQATKSVLYVSLGSIASWDEKELTEVAWGLANSKQKFLWVIRPGTINDVSEWLESLPKEVKVAIEERGCIVKWAPQREVLAHQGVGGFWSHCGWNSTLESLCEGVPIMCQPHFGDQGVNARLLSRVWKVGLEWSNVIERNEVERAVRRLMVNEEGKEMAQRAFKLKNEIKLAVKAGSSYDALNGMVDSILSVNL 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00585 451 Gene3D Glycogen Phosphorylase B; 9 443 - -
Cca04g00585 451 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 5 447 - -
Cca04g00585 451 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 7 447 - -
Cca04g00585 451 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 79 416 IPR002213 GO:0008194
Cca04g00585 451 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 5 447 - -
Cca04g00585 451 CDD GT1_Gtf-like 8 425 IPR002213 GO:0008194
Cca04g00585 451 Gene3D Glycogen Phosphorylase B; 250 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00585 Cca-Chr4 5875584 5877766 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00585 7 443 Glycosyltransferase AT3G46670 45.861 5.74e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00585 - - gmx:100786860 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00585 04 5875584 5877766 Cca04g00585 04 5875584 5877766 ECH