Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00567 ATGGATTCCCAGGTCTTGCTAGGTGTTGCACTTTCATCCATTGGTGGTTTCAGCACTTCCATCGGTGCACTTTTTGTAATCATGAGTCAAGCTCCAAGTTTGAAGGTTCTTGGGCTGTTACAGGGTTTTGCTGCTGGTTTGATGCTGAGCATATCATTCTTTGATCTCGCACATAATGCCTTGAACACACTTGGCTTCCTCAGAGGCAACCTTTGGTTTTTTGCTGGTGTCATATTTTTTGCTGTTGTTGCCAAATTCATACCAGAACCAACAGTTACTCCTCCCACTTCAGATGACAAGATTACAAAGAAAGTTGGGAAAGAAGGAAAGAAAGACATTATGAAAAAGCGTCGCCGTCAAGTTTTACTCAGTGGAGTTATTACAGCCATAGGTATAAGCTTGCATAATTTTCCAGAAGGAATGGCAGTGTACCTTGGATCCATGAAGGGCATTCGTGTTGGTCTTAACCTTGCCCTAGCTATTGCTCTGCACAATATCCCAGAGGGTGTTGCTGTTGCGCTTCCTGTCTATTTTGCGACACAGAGTAAATGGGAGGCATTCAAATTGGCATCACTTTCTGGCTTTGCTGAGCCCCTGGGTGTTATAATTGTAGCCTGTTTATTCCCTACCAGCCTAAATCCTGAGATTCTTGAAGGTATCCTTGGATCAGTTGGAGGAGTGATGGCTTTTCTAACCCTTCATGAAATGTTGCCATTGGCTTTTGAGTATGCTGGACAAAAACAATCTGTTAAGGCCGTCTTTTGTGGGATGGCTTTCATGTCTGCAAGCCTCTATTTTCTACGTATGAGCTTACCAGAGGACATGTAA 828 0.4348 MDSQVLLGVALSSIGGFSTSIGALFVIMSQAPSLKVLGLLQGFAAGLMLSISFFDLAHNALNTLGFLRGNLWFFAGVIFFAVVAKFIPEPTVTPPTSDDKITKKVGKEGKKDIMKKRRRQVLLSGVITAIGISLHNFPEGMAVYLGSMKGIRVGLNLALAIALHNIPEGVAVALPVYFATQSKWEAFKLASLSGFAEPLGVIIVACLFPTSLNPEILEGILGSVGGVMAFLTLHEMLPLAFEYAGQKQSVKAVFCGMAFMSASLYFLRMSLPEDM 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00567 275 PANTHER ZINC/IRON TRANSPORTER 2 267 - -
Cca04g00567 275 Pfam ZIP Zinc transporter 118 261 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cca04g00567 275 PANTHER ZIP METAL ION TRANSPORTER FAMILY PROTEIN 2 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00567 Cca-Chr4 5687538 5691097 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00567 K07238 - gmx:100793378 481.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00567 04 5687538 5691097 Cca04g00567 04 5687538 5691097 ECH