Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00566 ATGAATCAACAGAACCGACCAAAACTTGTTGTACAATTAAGATTATTCTATTTGACTCTCTTTCCTCCTATCCTTTTCACAAAACTGCAAGAACTTTCTCGGTCGTTGCATCAATGGCGGCCTAGCCCAATTCAAAACCCTAACCCCCCCCTCCCCCAATCTCCCCGCGACAAGCCCAAATGgcctccaccctcgccctccgattcagatcccacctccgccttaccgccgccgtcctccgccGGCCTCCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAATCGGTGGACATCGGCGCCCGCGCCCGGCAGCTCCAGACCCGGCGGCTCTGGACCTACGCCCTTACATTCGGGTGTATGGCGGGGTTCGTGGTGATCGTCCTCAACAACTTCCAAGACCAGCTAGTCTTCTACGTGACCCCCACCGACGCCCTCGAAAAGCACGCCGCCAACCCCTCCAAGTCCCGCTTCCGGCTCGGCGGCCTCGTCCTCGAGGGCAGCGTCGTCTACCCCGCCTCCTCCCCGGAGGTCGAGTTCGTCGTCACCGATCTCATCACCGACATCCTCGTCCGCTACCAGGGCGCCCTCCCTGATCTCTTCCGCGAAGGCCACTCCGTCGTCGTCGAAGGCCTCGTCAAACCCTTCACCGACGACATCAAGGGAGGGGTTTCCGCCAAGAGCGTCTCCGAGAAGGCGCGGAGCATAGACTGTTACTTTTCCGCTACCGAGGTTCTCGCCAAGCACGACGAGAAGTACATGCCTAAGGAAATTGCTGCTGCTATTGAGAAGAATAAGAACATTGTCATCGAAGCTGCCACCGTGGCCGCCGCCGAGACACCCAAGACCACATAG 876 0.5046 MNQQNRPKLVVQLRLFYLTLFPPILFTKLQELSRSLHQWRPSPIQNPNPPLPQSPRDKPKWPPPSPSDSDPTSALPPPSSAGLPXXXXXXXXXXXXXXXXXKSVDIGARARQLQTRRLWTYALTFGCMAGFVVIVLNNFQDQLVFYVTPTDALEKHAANPSKSRFRLGGLVLEGSVVYPASSPEVEFVVTDLITDILVRYQGALPDLFREGHSVVVEGLVKPFTDDIKGGVSAKSVSEKARSIDCYFSATEVLAKHDEKYMPKEIAAAIEKNKNIVIEAATVAAAETPKTT 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00566 291 MobiDBLite consensus disorder prediction 43 73 - -
Cca04g00566 291 Hamap Cytochrome c-type biogenesis protein CcmE [ccmE]. 111 273 IPR004329 GO:0017003|GO:0017004|GO:0020037
Cca04g00566 291 Gene3D - 139 269 IPR012340 -
Cca04g00566 291 PANTHER CYTOCHROME C-TYPE BIOGENESIS PROTEIN CCME HOMOLOG, MITOCHONDRIAL 101 286 IPR004329 GO:0017003|GO:0017004|GO:0020037
Cca04g00566 291 MobiDBLite consensus disorder prediction 39 93 - -
Cca04g00566 291 Pfam CcmE 114 263 IPR004329 GO:0017003|GO:0017004|GO:0020037
Cca04g00566 291 SUPERFAMILY Heme chaperone CcmE 139 268 IPR036127 GO:0005886|GO:0017003|GO:0017004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00566 - - ccaj:109813383 348.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00566 04 5683006 5685113 Cca04g00566 04 5683006 5685113 ECH