Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00498 ATGATGATGGCCTCCAAATCAAATTCCATAACATTTGGAATTGGTTCTTTCACAACTTGCCCTCTCTCTGGAACTAGAACCTGCTGCATTCACGTTCTTCCCAATCCAAATGCAAAATCCAGAGCCAGAGACATATTTTCTCTCAGTCTGTCCAAGAGGAGGAGCTTAGGTATTCTTTCTAGTCCCACCGTGACAACTCTCAGACATCTCAATACACCAATTTCAGCTGTTAATTCAGGTTTAGAAGCATCAATTACAGATTCCAACGATATTTCAGCCATCTTAACAAATGCCAAAATAGTTGTAGATTCCGAAGATGAAAATAAGATACAATTAAGAGTGGACTTGACTGGTGATCAAACACAAAAGGTATTCGACAGGATCCTAACAAACTTAGGTCGTACTGCCCCACCAGTTCCTGGATTTCGCATGCAAAAAGGAGGAAAATCATCAAAGATCCCAAAGGATTTCCTTGTACAGATGCTTGGGGAAGAACGTGTCACCAAGTTTGCAATACAAGAAATACTCAACTCTACCATGGGTGATTATGCAAAAAAGGAAAACTTGGATGTAAAGGACCGCAAAATAAGCACCACCCAAACGGCAGAACAACTAAAAAAATCATTCACGCCAGGAAATGAATTTGGCTTCAATGTTATAATTGAGCCTGAAAAATCATAA 681 0.3965 MMMASKSNSITFGIGSFTTCPLSGTRTCCIHVLPNPNAKSRARDIFSLSLSKRRSLGILSSPTVTTLRHLNTPISAVNSGLEASITDSNDISAILTNAKIVVDSEDENKIQLRVDLTGDQTQKVFDRILTNLGRTAPPVPGFRMQKGGKSSKIPKDFLVQMLGEERVTKFAIQEILNSTMGDYAKKENLDVKDRKISTTQTAEQLKKSFTPGNEFGFNVIIEPEKS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00498 226 Pfam Bacterial trigger factor protein (TF) 100 219 IPR008881 GO:0006457|GO:0015031
Cca04g00498 226 Gene3D - 100 223 IPR036611 GO:0006457|GO:0015031
Cca04g00498 226 SUPERFAMILY Trigger factor ribosome-binding domain 100 220 IPR036611 GO:0006457|GO:0015031
Cca04g00498 226 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 55 226 IPR005215 GO:0015031
Cca04g00498 226 PANTHER OS01G0894700 PROTEIN 55 226 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00498 - - var:108339891 347.051