Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00491 ATGTCGTACGACGATGTGGAGATCGAGGACATGGAGTGGAACGAGGAGTTGCAGGCCTACACGTACCCGTGCCCGTGCGGTGACCTATTCCAGATCACGAAGGACGACCTCAAACTTGGCGAAGAAATCGCTCGATGCCCTAGCTGCTCCCTCTACATCACCGTCATCTACAACATCGAAGATTTCCTCGCCGATTCCGATCAAAATCGACAAAACAAGGGCCTTCAACCCCTCACTGTTGCTTGA 246 0.5285 MSYDDVEIEDMEWNEELQAYTYPCPCGDLFQITKDDLKLGEEIARCPSCSLYITVIYNIEDFLADSDQNRQNKGLQPLTVA 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00491 81 Gene3D DPH Zinc finger 1 81 IPR036671 -
Cca04g00491 81 ProSiteProfiles DPH-type metal-binding (MB) domain profile. 2 58 IPR007872 -
Cca04g00491 81 Pfam CSL zinc finger 4 58 IPR007872 -
Cca04g00491 81 PANTHER DPH3 HOMOLOG 2 72 - -
Cca04g00491 81 PANTHER DPH3 HOMOLOG-RELATED 2 72 IPR044248 GO:0017183|GO:0046872
Cca04g00491 81 SUPERFAMILY CSL zinc finger 2 73 IPR036671 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00491 K15455 - gmx:100500529 161.384