Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00484 ATGGAGTTCGTTCCTGAAGAAGGCAAGCAACTTCACGAGGATTGCTCCACTCTGATTTTGCCTGCTCTGTCGATTGGCAATGTGGGGCAGCTAGTTGCAGATCTTTTGATCTCATCAATGGGTTCAGAGAGAGTAGGATATTTAGATGATCCTAACGTTTTGCCCTGTGTTGGCAATGATGCTTATGGACCCTTTCCTCAAGGAGACCTTGCTCTTCCTCTTGAAGCTTATGATTCCCCCTCTAATGCTCTCACTGTCATACAACAGAGGTCCCCAGTGATTAAGGGTATGATGGTTGAGTTTGCCAAAAACATGGCTGATTTTATTGCTGGTATTGGAAAGAAGCATATTATTGTTCTCTCCAGCTTAGATTTTGGAAAGTGGCAAAAGGTTGACATGTCAAGTGGTTTGCAGATTTATTACCTTTCCAGTGCCAACAGCAATGGAACAGATGAAAATTGTGAACAGCTTGGGTGGAAGAAGCTTCAGGAGTATGACCCTTCTCAAAAGCATTGGAAATATCTTAGTGATTTAGCTGAAGGAAATGCAACTCTGGAAGATATTATTTCTGTAGAAGATGAACTAGAACAGGAAAATTATTATGCTAGCTTGCCTTATGCTGCACTTTTTTCTTTTCTCAAGGCTAAAGGTTTGAAGGTGACCTGCTTGTTATGTTATTGCTCAGAAGGGGACAACATATCAGATGCTTTTCAATTAGCCGATGCAGTATGTAAACTTCATCGGCTGAGTCACCCTGCTGTTGGGATTGAAGGTGACAAATGGCGAGTTCCACTTTCTTGGATGAGTGTATATGGACCACCCCCAGATGTGTCCATCTTCTAA 843 0.4223 MEFVPEEGKQLHEDCSTLILPALSIGNVGQLVADLLISSMGSERVGYLDDPNVLPCVGNDAYGPFPQGDLALPLEAYDSPSNALTVIQQRSPVIKGMMVEFAKNMADFIAGIGKKHIIVLSSLDFGKWQKVDMSSGLQIYYLSSANSNGTDENCEQLGWKKLQEYDPSQKHWKYLSDLAEGNATLEDIISVEDELEQENYYASLPYAALFSFLKAKGLKVTCLLCYCSEGDNISDAFQLADAVCKLHRLSHPAVGIEGDKWRVPLSWMSVYGPPPDVSIF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00484 280 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 280 IPR016562 -
Cca04g00484 280 Pfam PAC2 family 18 246 IPR019151 -
Cca04g00484 280 PIRSF UCP010044 14 280 IPR016562 -
Cca04g00484 280 Gene3D - 188 280 IPR038389 -
Cca04g00484 280 Gene3D - 14 173 IPR038389 -
Cca04g00484 280 PANTHER PROTEASOME ASSEMBLY CHAPERONE 2 1 280 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00484 K11876 - gmx:100812348 543.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00484 04 4767697 4771545 Cca04g00484 04 4767697 4771545 ECH