Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00475 ATGACTACCTTGCCAAGAGGTTTCACGGAAGAGCAAGAAGCTCTTGTGGTCAAGTCATGGACCGTAATGAAGAAGAATTCCGGAGAGTTGGGCCTCAAGTTTTTCTTGAAAATATTTGAGATTGCTCCATCAGCTCAGAAATTGTTCCCATTCTTGAGAGATTCAACGGTTCCTTTGGAGCAAAACCCCAAGCTCAAGCCCCATGCCACGTCTGTCTTTGTCATGACCTGTGATTCAGCGGTTCAACTGCGGAAGGCTGGTAAAGTCACAGTCAGAGAATCAAACTTGAAAAAATTAGGTGCTACCCATTTTAAATACGGCGTAGCAAACGAGCATTTTGAGGTAACAAAGTTTGCACTTTTGGAGACCATAAAAGAAGCTGTACCTGAAATGTGGTCACCAGCCATGAAGAATGCATGGGGAGAAGCTTATGCTCAGCTGGTGGATGCCATTAAATCTGAAATGAAACCCTCTTCTTAG 480 0.4396 MTTLPRGFTEEQEALVVKSWTVMKKNSGELGLKFFLKIFEIAPSAQKLFPFLRDSTVPLEQNPKLKPHATSVFVMTCDSAVQLRKAGKVTVRESNLKKLGATHFKYGVANEHFEVTKFALLETIKEAVPEMWSPAMKNAWGEAYAQLVDAIKSEMKPSS 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00475 159 ProSitePatterns Plant hemoglobins signature. 62 73 IPR019824 GO:0019825|GO:0020037
Cca04g00475 159 Gene3D Globins 7 154 IPR012292 GO:0019825|GO:0020037
Cca04g00475 159 PANTHER LEGHEMOGLOBIN-RELATED 4 157 IPR001032 GO:0019825|GO:0020037
Cca04g00475 159 PANTHER NON-SYMBIOTIC HEMOGLOBIN 4 157 - -
Cca04g00475 159 SUPERFAMILY Globin-like 6 156 IPR009050 -
Cca04g00475 159 Pfam Globin 33 151 IPR000971 GO:0020037
Cca04g00475 159 CDD class1_nsHb-like 8 156 - -
Cca04g00475 159 PRINTS Plant globin signature 9 26 - -
Cca04g00475 159 PRINTS Plant globin signature 34 54 - -
Cca04g00475 159 PRINTS Plant globin signature 62 90 - -
Cca04g00475 159 PRINTS Plant globin signature 127 153 - -
Cca04g00475 159 ProSiteProfiles Globin family profile. 8 156 IPR000971 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00475 Cca-Chr4 4690713 4692880 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00475 - - gmx:102661758 296.204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00475 04 4690713 4692880 Cca04g00475 04 4690713 4692880 ECH