Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00474 ATGGAGGCCAGAGTTTTCACGGAAGAGCAAGAAGCTCTGGTGGTCAAATCATGGAACGCAATCAAGAACAATTCTCAAGAATTGGGTCTCAAGTTTTTCAACAAAATATTGGAGATTGCTCCAGCAGCTCAGCAATTGTTCTCATTCTTGAAAGATTCAAATGTGCCTTTGGACCAAAATCCCAAGCTCAAGCCCCACGCCATGGCTGTCTTTGTCATGACATGTGAATCAGCTGTTCAACTGCGGAAAGCTGGTAAAGTCACTGTGAGGGAATCAAACTTGAAAAAATTAGGTGCTACTCATTTTAAAGCCGGTGTAGCACCCGAGCATTTCGAGGTAACAAAGTTGGCACTTGTGGAGACCATAAAAGAAGCAGTGCCTGAAATGTGGTCAGAGGCCATGAAGAATGCATGGGAAGAAGCTCATGATCAGCTGGCTGATGCCATCAAATCTGAAATGAACCCATCCGCTTAG 474 0.4451 MEARVFTEEQEALVVKSWNAIKNNSQELGLKFFNKILEIAPAAQQLFSFLKDSNVPLDQNPKLKPHAMAVFVMTCESAVQLRKAGKVTVRESNLKKLGATHFKAGVAPEHFEVTKLALVETIKEAVPEMWSEAMKNAWEEAHDQLADAIKSEMNPSA 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00474 157 PANTHER LEGHEMOGLOBIN-RELATED 4 155 IPR001032 GO:0019825|GO:0020037
Cca04g00474 157 SUPERFAMILY Globin-like 5 154 IPR009050 -
Cca04g00474 157 PANTHER NON-SYMBIOTIC HEMOGLOBIN 4 155 - -
Cca04g00474 157 PRINTS Plant globin signature 7 24 - -
Cca04g00474 157 PRINTS Plant globin signature 32 52 - -
Cca04g00474 157 PRINTS Plant globin signature 60 88 - -
Cca04g00474 157 PRINTS Plant globin signature 125 151 - -
Cca04g00474 157 Gene3D Globins 5 152 IPR012292 GO:0019825|GO:0020037
Cca04g00474 157 Pfam Globin 31 149 IPR000971 GO:0020037
Cca04g00474 157 ProSitePatterns Plant hemoglobins signature. 60 71 IPR019824 GO:0019825|GO:0020037
Cca04g00474 157 ProSiteProfiles Globin family profile. 6 154 IPR000971 GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00474 Cca-Chr4 4686178 4687468 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00474 - - gmx:100809295 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00474 04 4686178 4687468 Cca04g00474 04 4686178 4687468 ECH