Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00469 ATGGATGATACGGCAACACCTTCAACTGCTTCGGCCTACCTTAATCCTTCCTACTGGGATGAGAGGTTCTCGAAAGAGGAGCAATATGAGTGGTTCAAAGATTATTCCCATTTTCGCCACTTGATTCAACCCCATCTCACGCCCCATTCCGCTGTACTGGAACTTGGATGTGGAAACTCACAAATGTGTGAAGAGTTGCATAGGGATGGCACAACCAACATAACTTGCATTGACCTTTCACCTGTTGCAGTTCACAACTTGCAAAAACGGTTACTCTCCCGGGGATTCAAAGACATAAAAGTGCTGCAAGCTGATATGCTAGAGCTACCTTTTGAGGATGAGTGTTTTGATTTGGTTATTGAGAAAGGAACTATGGATGTATTGTTCGTGGACAGTGGTGATCCGTGGAATCCAAAGCCTGAAACCATGTCAAAGGTCATGGCCATGTTGAAAGGTGTTCACAGAGTTTTGAAAGCTGGTGGCACATTTATCTCAGTAACTTTTGGCCAGCCACATTTCAGGCGCCCTATATTTAATGCACCGGATTTCAGCTGGTCTGTTGAGTGGACTACTTTTGGTGAAACTTTTCATTATTTTGTCTATGTTCTGAAGAAGGTTGGACCACATAACCTCTCCTTGTTTTTCTTATGA 651 0.4347 MDDTATPSTASAYLNPSYWDERFSKEEQYEWFKDYSHFRHLIQPHLTPHSAVLELGCGNSQMCEELHRDGTTNITCIDLSPVAVHNLQKRLLSRGFKDIKVLQADMLELPFEDECFDLVIEKGTMDVLFVDSGDPWNPKPETMSKVMAMLKGVHRVLKAGGTFISVTFGQPHFRRPIFNAPDFSWSVEWTTFGETFHYFVYVLKKVGPHNLSLFFL 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00469 216 Pfam Methyltransferase domain 53 164 IPR013216 GO:0008168
Cca04g00469 216 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 201 IPR029063 -
Cca04g00469 216 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 7 186 - -
Cca04g00469 216 CDD AdoMet_MTases 52 168 - -
Cca04g00469 216 Gene3D Vaccinia Virus protein VP39 10 211 IPR029063 -
Cca04g00469 216 PANTHER EEF1A LYSINE METHYLTRANSFERASE 4 7 186 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00469 K22857 - gmx:100807535 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00469 04 4650449 4652718 Cca04g00469 04 4650449 4652718 ECH