Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00468 ATGCCTATGGAGGCTTTTTCCGTACAGTCTCTGACTGCAACCACCATTCCTTCCTCTTTGTCACGTAGAAGGGTCACAGACATACCTTCTGCCCACGTTAACCTTTCCCATTTCACAAGGTACCCCTCTACCTCAAGATCCACAAAACACAAAATTCGTGGCACCAGAGCTCAAGCTTCAGGTTCGACAAAATCTAGTACTGGTACTGCTGAGGGGATTCCTGGAAAAACAGATTCCAAGGATGACAATTTAGTATTTGTTGCGGGTGCTACTGGTAGAGTTGGTTCCCGGACAGTGAGGGAACTCATAAAGCTTGGATTTAAAGTCAGAGCTGGAGTGAGAAGTGCTCAGAGGGCTGGTGCATTAGTTCAGAGTGTTGAACAATTGAAGCTTGATGGTACAAGTGCAAGTGGAGGGGGACAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAACCAGATACAATTGGACTGGCATTAGGGAATGCTTCAACAGTGGTATGCAGCATTGGTGCCAGTGAGAAGGAAGTTTTGGACATTACTGGACCCTTTCGAATAGATTATCAGGCCACCAAAAATCTAATTGACGCTGCAACTGTTGCCAAAGTAAATCACTTCATATTGGTTACTTCGCTTGGAACAAACAAAATTGGATTTCCTGCAGCTATCCTCAATTTGTTTTGGGGAGTCCTGGTTTGGAAAAGGAAGGCAGAAGAAGCATTGCTAGCTAGTGGAGTTCCATACACAATAGTGAGACCTGGAGGAATGGAGCGGCCTACGGATGCTTTCAAGGAAACTCATAATATAACCCTATCAACGGAAGATACTTTATTTGGGGGTCTGGTGTCAAACCTTCAGATAGCTGAACTCATTGCAGTCATGGCCAAGAACCGTGATCTTTCATATTGTAAAATAGTGGAGGCAATTGCAGAGACAACTGCACCCTTAACTCCCATGGAGGAACTTCTGGCAAAGATACCTTCTCAACGCCCTTACATTTCTTCACCCAAGAAACCAGATATTGCAGCTGCCAGTGTTCCAGATCCCTCTTCTAATGTTGTGGCTGCGGAACCTAGCGTTGCCACTCACCAAGAAACTGCACAACCTAAACCAGTGGCAAAACAGCCACTTTCTCCCTACATCGTGTAA 1158 0.4516 MPMEAFSVQSLTATTIPSSLSRRRVTDIPSAHVNLSHFTRYPSTSRSTKHKIRGTRAQASGSTKSSTGTAEGIPGKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFKVRAGVRSAQRAGALVQSVEQLKLDGTSASGGGQAVEKLEIVECDLEKPDTIGLALGNASTVVCSIGASEKEVLDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWKRKAEEALLASGVPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELIAVMAKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAASVPDPSSNVVAAEPSVATHQETAQPKPVAKQPLSPYIV 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00468 385 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 300 IPR036291 -
Cca04g00468 385 CDD SDR_a5 85 300 - -
Cca04g00468 385 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 3 385 IPR044719 -
Cca04g00468 385 MobiDBLite consensus disorder prediction 41 77 - -
Cca04g00468 385 Pfam NAD(P)H-binding 89 300 IPR016040 -
Cca04g00468 385 MobiDBLite consensus disorder prediction 361 385 - -
Cca04g00468 385 Gene3D - 81 332 - -
Cca04g00468 385 MobiDBLite consensus disorder prediction 54 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00468 Cca-Chr4 4644412 4648690 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00468 - - gmx:100779056 669.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00468 04 4644412 4648690 Cca04g00468 04 4644412 4648690 ECH