Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00464 ATGGCTGTTCTTACACCTGTAAGTTCATGTGTTGAATCAAAGTATCATGCTCTAGCTCCATTGAGGATTTTAAGGGGTCTGGTGTGTCTACTGGTGCTGTTCTCAACAGCATTTGTAATGTTAGTGTACTTTGGCTTTATAAGTGCCGTTATAGTGCGACTTTTTAGCGTCAGTTACAGCAGGAGAGCAACTTCCTTCTTCTTTGGTGCTTGGCTAGCCTTGTGGCCTTTTCTATTTGAAAAGATCAACAAGACTAAAGTTGTGTTTTCTGGAGATATTGTTCCTTCAAGAGAACGGATCTTACTGATTGCAAATCATAGAACTGAGGTTGACTGGATGTATTTATGGGACCTTGCCTTGAGGAAGGGATGCCTTGGATACATAAAATATATACTTAAGAGTAGCTTGATGAGACTTCCAATTTTTGGTTGGTCATTTCACATACTAGAGTTCATCCCGGTGGAAAGAAAGTGGGAGGCTGATGAGTCAGTCATGCGCCATATGCTTTCAACATTCAAGGATCCACAAGATCCTCTCTGGCTTGCTCTTTTCCCAGAAGGCACTGATTTCACTGAGCAAAAGTGCCTTCGGAGTCAAAAATATGCTGCTGAACATGGTCTACCGATTCTGAAAAATGTTTTACTTCCAAAGACAAAGGGCTTCTGCGCCTGCTTGCAACAGTTGAGGGGCTCTCTCAATGCAGTTTATGACGTGACAATCGGCTACAAATACCGCTGCCCATCTTTCTTGGACAATGTCTTTGGGGTGGATCCTTCTGAAGTTCATCTGCATATCTGCCGCATCCCCCTTGATAGTATCCCAGTATCTGAAGACGAAATTTCCTTGTGGTTGGTAAAAAGATTCCAGTTGAAGGATCGGTTACTTTCCAATTTTCAAACTCAAGGTCAGTTTCCGGATCAGGCAACAGAAAGGGATCTCTCTGCTGTGAAGGGCATTTTAAATTGTATGACAATTGTTACATTGACAGGTACATGCATGTACTACAGTTTTTCCTCTCTCTGGTTTAAACTTTATGTGTCTCTAGTCTGTGCTTATTTGGTTCCAGCCACATATTTCAATATTCGGCCACAGCCTATTCTTAGCTTTTTGAAGATGAGATCAAATTGTCACATCTCAAATACTTGA 1146 0.4162 MAVLTPVSSCVESKYHALAPLRILRGLVCLLVLFSTAFVMLVYFGFISAVIVRLFSVSYSRRATSFFFGAWLALWPFLFEKINKTKVVFSGDIVPSRERILLIANHRTEVDWMYLWDLALRKGCLGYIKYILKSSLMRLPIFGWSFHILEFIPVERKWEADESVMRHMLSTFKDPQDPLWLALFPEGTDFTEQKCLRSQKYAAEHGLPILKNVLLPKTKGFCACLQQLRGSLNAVYDVTIGYKYRCPSFLDNVFGVDPSEVHLHICRIPLDSIPVSEDEISLWLVKRFQLKDRLLSNFQTQGQFPDQATERDLSAVKGILNCMTIVTLTGTCMYYSFSSLWFKLYVSLVCAYLVPATYFNIRPQPILSFLKMRSNCHISNT 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00464 381 Pfam Acyltransferase C-terminus 254 308 IPR032098 -
Cca04g00464 381 PANTHER 1-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED 1 373 - -
Cca04g00464 381 PANTHER 1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 5-RELATED 1 373 - -
Cca04g00464 381 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 34 243 - -
Cca04g00464 381 SMART plsc_2 100 222 IPR002123 GO:0016746
Cca04g00464 381 CDD LPLAT_LCLAT1-like 76 265 - -
Cca04g00464 381 Pfam Acyltransferase 91 243 IPR002123 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00464 Cca-Chr4 4595450 4599032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00464 14 365 Miscellaneous Gene Families AT1G75020 63.173 3.41e-164 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00464 K13513 - gmx:100814885 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00464 04 4595450 4599032 Cca04g00464 04 4595450 4599032 ECH