Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00463 ATGGGGAGTCATATGAGCAAGAAGATCCCTGAAACTTCTTCTTCTATTGGCTTCGGCACCGAATTGCACTATAAAACTGAGTTGAGTTCATATGAGGCTGCTTGCAAGCTTGATTCTGATTTGCAGTCCTTTGACACCACACTTCAAGCTAGAACAAACCAGGTTATCAACACTCTTGCTGTTGGTGTTGAAGTTCGGGCCCTTTCATTTGATTCTCTAAAACAAATCACAGAATGCCTTCTTGAGATGAATCAGGAAGTTGTCAAGGTAATCTTGGACTGCAAGAAAGACATATGGAAGAGCCAAGAATTGTTTGAACTGGTTGAGGAGTACTTTGAGAATAGTCTCCAAACTTTGGATTTCTGCACCACATTGGAGAAGTGCCTAAAGAGAGCTCGTGATAGCCAATTGCTTATCCTTGTGGCTCTTCAACAATTTGAGGAGGAATCAGGATTAGGAGACAACCGCTATGTGAGGACATTGCGAGAGTTTAAGAATTTCAAGGAAGCTGGTGACCCTTTCACTGAGGAATTCTTCCAGATCTTTCAGTCTGTTTATAGGCACCAGATACTCATGCTTGAAAAGTTGCAACTAAGGAAGAACAAGCTTGATAAGAAGCTAAAATACATCCATTCTTGGAGGAAAGTTTCAAGTATGATCTTTGTGgctacttttgctgcagtcttgatctgctcggttgtagcagcagctattgcagcaccgcctgttgctgctgcgattgctgctgctacGTCGATCCCAATAGGATCAATGGGAAAGTGGATCGATTCCCTCTGGAGGAACTATGAAAATGCATTGAAAGGGCAGAAGGAAGTGATTAGCTCAATGCAGGCTGGTACTTATGTTGCTATAAAGGACTTGGACAACATTCGAGTTCTAGTTGATAGACTAGAAATTGAGATTGAATctctattgcataatgtggattttgccatagaggaacaagctgtgaaagttgccatagaggagatcaagaagagGCTAGGAGTGTTTATGAAGAATGTTGAAGATTTAGGAGTTCAAGCTGATATTTGTAGCCGTGACATAAGGAGGGCAAGGACTGTGGTACTGCAGAGAATCATAAAGCATCCCCAGAATTAA 1122 0.3529 MGSHMSKKIPETSSSIGFGTELHYKTELSSYEAACKLDSDLQSFDTTLQARTNQVINTLAVGVEVRALSFDSLKQITECLLEMNQEVVKVILDCKKDIWKSQELFELVEEYFENSLQTLDFCTTLEKCLKRARDSQLLILVALQQFEEESGLGDNRYVRTLREFKNFKEAGDPFTEEFFQIFQSVYRHQILMLEKLQLRKNKLDKKLKYIHSWRKVSSMIFVATFAAVLICSVVAAAIAAPPVAAAIAAATSIPIGSMGKWIDSLWRNYENALKGQKEVISSMQAGTYVAIKDLDNIRVLVDRLEIEIESLLHNVDFAIEEQAVKVAIEEIKKRLGVFMKNVEDLGVQADICSRDIRRARTVVLQRIIKHPQN 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00463 373 Coils Coil 294 321 - -
Cca04g00463 373 PANTHER UPF0496 PROTEIN 1 1 370 - -
Cca04g00463 373 PANTHER UPF0496 PROTEIN 3-RELATED 1 370 IPR007749 -
Cca04g00463 373 Pfam Protein of unknown function (DUF677) 41 367 IPR007749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00463 Cca-Chr4 4587872 4590061 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00463 - - gmx:100811667 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00463 04 4587872 4590061 Cca04g00463 04 4587872 4590061 ECH