Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00462 ATGATAGGTATGGAGAAGATTATGATTGTGGTTGTGGTGTTGGCGATTGTGATGATCGGGTCAGGGCCCATGTTGGCAATGGGCCAACTCTCGTTTTGTCATATGCCCAAAGATGGATTGAAGGCATGCTTGCCGAGTGTGAGTGGGGACAATCCTGTTGACCCTTCCACTGCTTGTTGCTCAGCAATTGCCtgtaacaagtcccacatcggggagccttatgctcgttacaTTGCCAAGGCTGATCTTCAATGTTTCTGTCGCTACAAGGATTCAGGATTGCTCTCTTTCTATGGTGTTGATCCCAACAAAGCCATGGAACTCCCTGTCAAGTGCAAGGTTGTGGACTCTTTCCACTGCTAG 363 0.4298 MIGMEKIMIVVVVLAIVMIGSGPMLAMGQLSFCHMPKDGLKACLPSVSGDNPVDPSTACCSAIACNKSHIGEPYARYIAKADLQCFCRYKDSGLLSFYGVDPNKAMELPVKCKVVDSFHC 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00462 120 PANTHER LIPID TRANSFER PROTEIN 78 120 - -
Cca04g00462 120 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 33 118 IPR036312 -
Cca04g00462 120 PANTHER LIPID TRANSFER PROTEIN 4 64 - -
Cca04g00462 120 Pfam Probable lipid transfer 12 119 IPR016140 -
Cca04g00462 120 PANTHER LIPID BINDING PROTEIN-RELATED 78 120 IPR039265 GO:0005504|GO:0009627
Cca04g00462 120 PANTHER LIPID BINDING PROTEIN-RELATED 4 64 IPR039265 GO:0005504|GO:0009627
Cca04g00462 120 CDD nsLTP_like 33 120 IPR044741 -
Cca04g00462 120 Gene3D - 29 120 IPR036312 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00462 7 120 Acyl Lipid Metabolism Gene Families AT5G48490 32.456 8.67e-15 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00462 - - aprc:113865173 153.68