Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00461 ATGTCGAAGCTGAtcttactcttccttgccctcattcctcttctctgctcctccttctcGCCGGAGACACCCTCAGATCGCCGCGTCCTCGTTTTGCTCGACGACTTCGCCCTCAAATCCTCCCACTCTCTCTTCTTCAACTCCCTCAAATCTCGCGGCTTCGATCTCCACTTCCACCTCGCCGACGACCCCAAAATCGCGCTCCAGAGATACGGCCAGTACCTCTTCGATGCCTTAATTCTCTTCTCCCCCACCATTGAACGTTTTGGAGGATCCGTTGACGCGGCTGCAATTCTTGATTTTGTCGATTCGGGTCATGATTTGGTCGTCGCTGCGGATAGCAATGCGTCTGATTTAATTAGGGAAATCGCCACCGAGTGTGGAGTGGACTTTGATGAGGATCCTGCTGCATTGGTTGTAGATCATTCTGGATATGCAGTCTCTGCTACCGAAGGGGATCACACGTTGATTGCTAGTGATGATTTTATCAAGTCTGACGTCATATTGGGAAGCAAAAAAATTGAGGCTCCAGTGCTTTTCCAGGGGATTGGGCATTCACTAAATCCTACCAATAGCCTGGTGTTGAAAGTTCTCTCTGCATCTCCTTCAGCCTTTTCTGCTAACCCAAAATCTAAAGTGACAACTCCTCCATCACTCACTGGATCTTCGATCTCATTAGTTTCAGTTATACAGGCAAGAAATAATGCTCGCATATTGATCTCTGGCTCATTGAGCATGTTCAGTAACCGATTTTTCAGGTCAGGTGTTCAGAAGGCTGGGAGTCCAATCAAACACGAGAAGTCAGGTAATGAGCAGTTCTTGAATGAACTTAGCAAATGGGTTTTCCACGAAAGAGGTCACCTCAAGGCGGTGAATGTGCAACACCACAAAGTTGGAGAAGCTAATGAACCAGCAATCTATAGGATCAATGATAATTTGGAATACTCTGTTGAAGTTTATGAGTGGTCTGGGTCAGCTTGGGAACCTTACGTAGCTGATGATGTTCAAGTGCAATTTTACATGATGAGCCCCTATGTCTTGAAGACTTTATCAACTGATGGAAAGGGCCGTTATTTCACATCATTTAAGGTTCCAGATGTCTATGGGGTATTCCAGTTCAAAGTTGAGTATGAAAAACTTGGATATACAAGCTTATCTTTAGCAAAACAGATTCCTGTTCGTCCCTTCAGACACAATGAATACGAAAGATTTATACCAGCAGCATACCCCTACTATGGAGCAGCATTTTCAATGATGGCTGGTTTCTTCGTTTTCACCGCAGTTCATCTATACAGCAAGTAG 1302 0.4347 MSKLILLFLALIPLLCSSFSPETPSDRRVLVLLDDFALKSSHSLFFNSLKSRGFDLHFHLADDPKIALQRYGQYLFDALILFSPTIERFGGSVDAAAILDFVDSGHDLVVAADSNASDLIREIATECGVDFDEDPAALVVDHSGYAVSATEGDHTLIASDDFIKSDVILGSKKIEAPVLFQGIGHSLNPTNSLVLKVLSASPSAFSANPKSKVTTPPSLTGSSISLVSVIQARNNARILISGSLSMFSNRFFRSGVQKAGSPIKHEKSGNEQFLNELSKWVFHERGHLKAVNVQHHKVGEANEPAIYRINDNLEYSVEVYEWSGSAWEPYVADDVQVQFYMMSPYVLKTLSTDGKGRYFTSFKVPDVYGVFQFKVEYEKLGYTSLSLAKQIPVRPFRHNEYERFIPAAYPYYGAAFSMMAGFFVFTAVHLYSK 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00461 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 - -
Cca04g00461 433 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT 4 433 IPR005013 GO:0005789|GO:0018279
Cca04g00461 433 Pfam Oligosaccharyltransferase 48 kDa subunit beta 28 433 IPR005013 GO:0005789|GO:0018279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00461 K12670 - gmx:100806848 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00461 04 4569831 4574272 Cca04g00461 04 4569831 4574272 ECH