Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00460 ATGGGGAAAGGAGGAGGTTGTTTTCCAAGCAAGACGAAGGCACCGATTAAGGATCCAATTAGTGTTGAAAGCTTAGCCCCAAGAAATGATCCAAGTAGCACAAGCCAAGAGGGTCCAGCAGCAGCACCTGAAGCAGTGAAAAAGCTGAAAATTTTCATTGTGTTCTATTCGACTTATGGCCATGTGGAGTCATTGGCAAGGTCCTTGAAGAAAGGGGTAGATTCAGTTGAAGGTGTTGAAGGGGTGTTGTACCGTGTTGTTGAGACACTGCCTAAGGAGGTGTTGCAACAAATGAAGGCACCTGAGAAGGATGATAAGGTGCCTCTCATATCTGCAGACAAGTTGGTGGAGGCTGATGGCTTGCTCTTTGGATTTCCGACAAGGTATGGCAGCATGGCAGCGCAGATGAAGGCGTTTTTCGATTCCACTGGCCACCTGTGGAAAGAACAGAAGCTGGCAGGGGTGCCTGCTGGCTTCTTTGTCAGCACTGGCACTCAGGGTGGAGGTCAAGAAACCACAGCTTGGACAGCAATCACACAGTTAGTCCACCATGGAATGCTCTATGTTCCTATTGGTTATAGCTTCGGTGCTGGAATGTTCGAAATGGACACCCTCAGAGGTGGATCTCCATATGGTGCTGGAGTTTTTGCTGGCGATGGATCAAGGCAAGCAAGTCAAACAGAACTGGCCCTTGCTCAGTATCAAGGAAGTTACATGGCCACAATTGTCAACAAGTTAGGCCACAAAAGCTAG 753 0.4847 MGKGGGCFPSKTKAPIKDPISVESLAPRNDPSSTSQEGPAAAPEAVKKLKIFIVFYSTYGHVESLARSLKKGVDSVEGVEGVLYRVVETLPKEVLQQMKAPEKDDKVPLISADKLVEADGLLFGFPTRYGSMAAQMKAFFDSTGHLWKEQKLAGVPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLYVPIGYSFGAGMFEMDTLRGGSPYGAGVFAGDGSRQASQTELALAQYQGSYMATIVNKLGHKS 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00460 250 MobiDBLite consensus disorder prediction 1 41 - -
Cca04g00460 250 Gene3D - 47 247 IPR029039 -
Cca04g00460 250 ProSiteProfiles Flavodoxin-like domain profile. 51 239 IPR008254 GO:0010181
Cca04g00460 250 SUPERFAMILY Flavoproteins 50 246 IPR029039 -
Cca04g00460 250 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 50 246 IPR010089 GO:0003955|GO:0010181
Cca04g00460 250 Pfam NADPH-dependent FMN reductase 64 191 IPR005025 GO:0016491
Cca04g00460 250 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 5 250 - -
Cca04g00460 250 PANTHER NAD(P)H:QUINONE OXIDOREDUCTASE, TYPE IV PROTEIN 5 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00460 Cca-Chr4 4566511 4568779 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00460 K03809 - gmx:100809530 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00460 04 4566511 4568779 Cca04g00460 04 4566511 4568779 ECH