Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00457 ATGGCTTTACCAGAGATTGGGTTGAAACTGCTTCTTTCTTCCGTTAATTCCAGCATTGTTGCTCGGGCAGCATGCTGTTCTATAGGGCTTGCGCTTCCCGTGTATTCCACGTTTAAAGCTATTGAGAACAATGACCCATATCAGCAACAAAGGTGCCTATTGTATTGGGCAGCTTATGGGTCTTTTAGTGCTGCAGAAATGTATGCTGAAAATTTACTTTCCTGGATTCCATTTTATTATCACTTGAAGTTAGCATTTCTTGTTTGGCTACAGCTTCCTGCTATCAATGGTGCAAAACAACTGTATTCTAGTCACCTGCGTCCATTCCTGTTGAAACATCAAGCTAGAATGGATCTGATTGTCGAATTTGTGTATGGTGAATTGTCTAAAATTGTTAGTGGATACCAAGCAGAATTGCAGTTTGCAAAAACTCTTGTAGTGAAGGTGTTAATGACAGCTACTCAGATGATTAGGAATCTCATTCATCCAGTTGGGAGGGAGTCAAATCGCATTGAACCCTTTAAGAGGCAGGTTCTGGATTCAGAATCAGAAGATGATTAA 561 0.4046 MALPEIGLKLLLSSVNSSIVARAACCSIGLALPVYSTFKAIENNDPYQQQRCLLYWAAYGSFSAAEMYAENLLSWIPFYYHLKLAFLVWLQLPAINGAKQLYSSHLRPFLLKHQARMDLIVEFVYGELSKIVSGYQAELQFAKTLVVKVLMTATQMIRNLIHPVGRESNRIEPFKRQVLDSESEDD 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00457 186 Pfam TB2/DP1, HVA22 family 33 109 IPR004345 -
Cca04g00457 186 PANTHER HVA22-LIKE PROTEINS 4 186 IPR004345 -
Cca04g00457 186 PANTHER HVA22-LIKE PROTEIN 4 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00457 Cca-Chr4 4541614 4544210 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00457 K17279 - gmx:100802071 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00457 04 4541614 4544210 Cca04g00457 04 4541614 4544210 ECH