Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00453 ATGCATGCAACCAGAAACATGGCCCAAAAATATAGTCCTTGGATCTTCTTTCTTCATCTACTAATAATCATGTGTTCCAGTAGAATCAGAGCCAGGGAATTGGTTGGAAGTGGAACTGACATTAACAAATTCTTGGAAGCGAAAGCAACCTCGGATGAAGATCATCAAACAACACACACAGAACATAAACATGGTCACTCCCACATGCACATGGACCCTTCTGTGATGGTGTTCTTCACCCTGAAAGATTTGAAGGTTGGAAAAACAATGCCAGTTTGTTTCCCCAAGAGGGACCCTTCAACCTCCCCCAAGTTGTGGCCAAGGGAAGAAGCTGAGCCACTCCCTTTCTCACTCGACCAACTCCCAAACCTTCTCAAATTCTTCTCTCTCACTCCACACTCCCCACAAGCCAAAGCCATGCAAGACACCCTTAGTGAATGTGAGAGCAAACCCATCAAAGGAGAGGTCAAGTTCTGTGCCACCTCTTTGGAGTCCATGCTTGACTTCACTCAAACCATCCTTGGCTCAAAATCTGGTCTCAATGTTTTTGCCACCTCTCACCTAACCAAATCAAGTATCACTTTCCAAAACTACACTATCTTAGAAAACATCATGGAAATCATTGCTCCCAAGATGGTGGCGTGCCACACCATGCCTTATCCTTATGCTGTTTTTTACTGCCACAGTCAAGAAAGTGAGAACAAGATATATAGGGTCTCACTTGCTGGTGAAAACGGGGACAGGCTGGATGCTATGGCTGTTTGTCACATGGACACGTCACAATGGGGGCGTGGCCATGTTTCCTTCCAAGTTCTCAAGATTCAACCTGGAACCTCCTCTGTGTGCCACTTTTTTCCAGCAGATAACCTCATCTTTGTTCCCAAACTCCAATCTCATGATTCTGCAACCATGTGA 915 0.4536 MHATRNMAQKYSPWIFFLHLLIIMCSSRIRARELVGSGTDINKFLEAKATSDEDHQTTHTEHKHGHSHMHMDPSVMVFFTLKDLKVGKTMPVCFPKRDPSTSPKLWPREEAEPLPFSLDQLPNLLKFFSLTPHSPQAKAMQDTLSECESKPIKGEVKFCATSLESMLDFTQTILGSKSGLNVFATSHLTKSSITFQNYTILENIMEIIAPKMVACHTMPYPYAVFYCHSQESENKIYRVSLAGENGDRLDAMAVCHMDTSQWGRGHVSFQVLKIQPGTSSVCHFFPADNLIFVPKLQSHDSATM 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00453 304 PANTHER BURP DOMAIN PROTEIN USPL1 16 296 - -
Cca04g00453 304 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 16 296 IPR044816 -
Cca04g00453 304 ProSiteProfiles BURP domain profile. 78 295 IPR004873 -
Cca04g00453 304 SMART BURP_2 76 295 IPR004873 -
Cca04g00453 304 Pfam BURP domain 77 294 IPR004873 -
Cca04g00453 304 MobiDBLite consensus disorder prediction 47 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00453 Cca-Chr4 4483910 4485601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00453 - - gmx:100800777 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00453 04 4483910 4485601 Cca04g00453 04 4483910 4485601 ECH