Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00446 ATGGACGAGAAGCTCTTACAGCGATTAGAATCGGCGGGGGGGCGCCTGGGGGCGCACCTCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCGGAGGCCACTCCTCCGCTGCACCGGCCGCCGGAGCCGATGCGGCCAACGATCCGTCCGTCGTCGCCTTCGCCGATCTGATCGACCAGCATGTCGCTAGGGTTTCCCGTGCTGCAGAGGCTATCGGAGGACAAGTCTTGGATGTGACAAAACTTGTGCAGGAAGCTTTCATTGTTCAGAAAGAGCTTTTGATTAAGCTCAAACAGTCTCAGAAGCCTGACCTTGCTGGATTGGCTGCATTTCTGAAACCATTGAATGAAGTGATCACAAAAGCTTCCGCATTGACAGAAGGAAGGAGGTCTGATTTTTTTAATCATTTAAAGGCTGCGACTGACAGTCTCTCAGCTCTAGCATGGATTGCTTATACGGGGAAGGATTGTGGTATGAGCATGCCAATTGCACACGTGGAAGAAAATTGGCAAATGGCTGAGTTTTACAGCAACAAGGTGCTTGTAGAGTACAGAAACAAAGACCCGAATCATGTTGAGTGGGCCAAAGCCCTTAAAGAGTTGTATCTACCTGGATTGAGAGATTATGTCAAGAGCTTTCATCCTTTAGGCCCTGTTTGGAGTCCAACTGGTAAAATAATTACACCATCAAAATCTTCTGCTCCTGTTGCACCTGCTGCTCCTCCCCCTCCATCTGCTTCTCTCTTTAGTTCCGAATCATCTCAGGCTTCATCTTCTAAGCCTAAAGATGGAATGTCTGCTGTTTTTCACCAACTCAGTTCAGGAAATGTTACTTCAGGTAGCTTATTCTTTACTCCTACATTTTTTATCGAATGTTCAGCATTAATGAATTGTAAACTTTATCTAATAGGTTTAAGAAAGGTTACGGATGATATGAAGACTAAGAATCGCACTGATAGAACTGGAGTTGTTGGTGCTAGTGAAAAAGAAAGTCATGCAAGCCCACGTGTGCCTCCTAAAGCAGGACCTCCAAAATTTGAACTTCAAATGGGCCGCAAATGGGTTGTTGAGAATCAAATTGAGAGGAAAGACTTGGTCATAAATGATTGTGATGCAAAGCAGTCTGTATATATTTATGGATGCAAAAACTCTGTTTTGCAGATTCCGGGTAGCAAGGTCAACAATATAACTATCGACAAATGCACAAAGATGGGAGTTGTATTTAAGGATGTTGTTGCAGCTTGTGAAATTGTAAACAGCAATGGGGTGGAGGTTCAATGTCAGGGTATAGCTCCTACAATTTCAGTGGACAACACTTCTGGCTGCCAGCTATATCTGAGCAAAGACTCTTTAGAAGCATCCATAACTACAGCAAAGTCAAGTGAGATCAATGTATTGGTTCCTGGTGCGGAGCCCGATGGTGATTGGGTGGAGCATTCTTTGCCACAACAATACATTCATTTGTTCAAGGATGGGCATTTTGAAACAGCTTCTGCTTCTCATTCTGGAGGTTAA 1596 0.4198 MDEKLLQRLESAGGRLGAHLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGHSSAAPAAGADAANDPSVVAFADLIDQHVARVSRAAEAIGGQVLDVTKLVQEAFIVQKELLIKLKQSQKPDLAGLAAFLKPLNEVITKASALTEGRRSDFFNHLKAATDSLSALAWIAYTGKDCGMSMPIAHVEENWQMAEFYSNKVLVEYRNKDPNHVEWAKALKELYLPGLRDYVKSFHPLGPVWSPTGKIITPSKSSAPVAPAAPPPPSASLFSSESSQASSSKPKDGMSAVFHQLSSGNVTSGSLFFTPTFFIECSALMNCKLYLIGLRKVTDDMKTKNRTDRTGVVGASEKESHASPRVPPKAGPPKFELQMGRKWVVENQIERKDLVINDCDAKQSVYIYGCKNSVLQIPGSKVNNITIDKCTKMGVVFKDVVAACEIVNSNGVEVQCQGIAPTISVDNTSGCQLYLSKDSLEASITTAKSSEINVLVPGAEPDGDWVEHSLPQQYIHLFKDGHFETASASHSGG 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00446 531 MobiDBLite consensus disorder prediction 258 292 - -
Cca04g00446 531 SUPERFAMILY N-terminal domain of adenylylcyclase associated protein, CAP 77 271 IPR036222 -
Cca04g00446 531 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 67 307 IPR001837 GO:0003779|GO:0007010
Cca04g00446 531 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 329 530 IPR001837 GO:0003779|GO:0007010
Cca04g00446 531 MobiDBLite consensus disorder prediction 273 292 - -
Cca04g00446 531 Pfam Adenylate cyclase associated (CAP) C terminal 370 527 IPR013912 GO:0003779|GO:0007010
Cca04g00446 531 Gene3D - 369 530 IPR016098 -
Cca04g00446 531 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 67 307 - -
Cca04g00446 531 PANTHER ADENYLYL CYCLASE-ASSOCIATED PROTEIN 329 530 - -
Cca04g00446 531 MobiDBLite consensus disorder prediction 344 371 - -
Cca04g00446 531 ProSiteProfiles C-CAP/cofactor C-like domain profile. 370 508 IPR017901 -
Cca04g00446 531 SMART carp 447 484 IPR006599 -
Cca04g00446 531 SMART carp 408 446 IPR006599 -
Cca04g00446 531 Gene3D - 77 252 IPR036222 -
Cca04g00446 531 SUPERFAMILY C-terminal domain of adenylylcyclase associated protein 370 530 IPR036223 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00446 K17261 - gmx:100793194 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00446 04 4407980 4412733 Cca04g00446 04 4407980 4412733 ECH