Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00439 ATGGCTTCCTTGCTTTGTAAATCAGCGGTGAGGGTGGGTTCTAGATCCTTCGCTAATCGTTCTAGAAGCTTCGTTCAGAGCTCAACGACTCCGTTTCTGCTCTCTTCGGCTTCCTCACCACGCATCCCTCTGGCTTCAAGGGTTTTGTCGGTTGTGATAAGCGTTGAGTCGTTGATGCCTCTTCACAGTGCTATCGCTGATGCTAGGCTTACGTCGAATATCGCTTTCGATTCCACGTGCTGGAGCTCGCTTTCTCGAGGGCTTAAAAAAACATTGTTAAGGGCTTCCCATGAAACCTCTTCTTCCTGTTCATCGCTTAGCCATAAGCTAGGAGGGTTGCAAGATCTGCATGTATGTGTTGAAAATTTGTTCCAGCTTCCCCTCACCCAAGAAGCACTTCACCACGAGTCTCAAGAAAAGTGGGTTGATGAGCTTCTGAATGGATCCTTAAGGGTCTTAGATGTGTGCACTGCCACCAAAGACTCTCTACTGCATACAAAAGAGTGCATGCGTGATCTTCAATCAATTATGAGAAGGAGAAAGGGTGGTGAAGTGGCAGAGATTAAGAAGTTCTTGACTTCAAGGAAGGTGGTGAAAAAGGCCATCTCGAAAGCCTTGGAAAATTTGAAGGCTACTTTGAGTGCTAACTAA 651 0.4639 MASLLCKSAVRVGSRSFANRSRSFVQSSTTPFLLSSASSPRIPLASRVLSVVISVESLMPLHSAIADARLTSNIAFDSTCWSSLSRGLKKTLLRASHETSSSCSSLSHKLGGLQDLHVCVENLFQLPLTQEALHHESQEKWVDELLNGSLRVLDVCTATKDSLLHTKECMRDLQSIMRRRKGGEVAEIKKFLTSRKVVKKAISKALENLKATLSAN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00439 216 Pfam Protein BPS1 109 211 IPR004320 GO:0048364|GO:0048367
Cca04g00439 216 PANTHER DUF241 DOMAIN PROTEIN 93 212 - -
Cca04g00439 216 PANTHER BPS1-LIKE PROTEIN 93 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00439 Cca-Chr4 4358729 4363795 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00439 - - gmx:100802945 201.445