Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00429 ATGGCCACTACTAAGATTCTCATCATCGGAGGAACTGGATTCTTGGGAAAGTTCATGGTGGAGGCCAGTGCCAAGGCTGGCCACTCCACCTTTGCCCTAGTTCGAGAGTCATCTCTTTCTGACCCTATCAAATCATCCATCATTCAAAAATTCAACGCCTTGGGTGTCAACGTTGTTTTGGGAGATATACATGATCATAAGAGTTTGGTCAGGGCGATAAAGCAGGTAGATGTGGTCATCTGTGTTGTGAATCACTTGCAGATAAACGATCAATATAAACTCATTTATGCCATTAAGGAAGCAGGAAATGTTAAGAGATTCTTTCCTTCAGAATTTGGACATGATGTTGATCGAACCCATGCCCTGGATGAAGGAAAGAATTTATTTGACACTAAAGCCCAAATTCGTCGAACCATTGAGGCTCAAGGAATTCCTCATACCTATGTGGTGGCCAACTCTTTTATTGGACACTACCTACCCACTTGGTCAGATCTTGGACCCATAACTGGCCTGATAGATAGTACTGTTATTCTTGGAGATGGAAAGGCCAAAGCTGTTCTCAATACCGAAAAGGATATTGCCACTTATACCATTAGAAGTGTTGATGATCCAAGAACCTTGAACAAAATTCTCTACATTAAACCCCCAGCCAACATCATATCATATAATGACCTAGTATCTCTTTGGGAGAAGAAACATAGTAAGAATCTCAAAAGAGTCTATGTACCTGAAGTACAAGTTTTGAAGTATATTGAAGAGTCTTCATTTCCCTTCAATATGGCTATGTCAATTTGCCACGCTGCATATGTTAAGGGAGATCACACTAACTACGAAATAGAACCCTCATTTGGAGTTGAAGCTTCAGAGCTCTATCCTGATATTAAATACACCACTTTGGAGGAGTTCTTCAATCACAATGATTCTTGCACGCCGTTTTACTTAAACCGGTTTATACTGGTTAACGGTGTACAAAATTTTTATTAA 984 0.4004 MATTKILIIGGTGFLGKFMVEASAKAGHSTFALVRESSLSDPIKSSIIQKFNALGVNVVLGDIHDHKSLVRAIKQVDVVICVVNHLQINDQYKLIYAIKEAGNVKRFFPSEFGHDVDRTHALDEGKNLFDTKAQIRRTIEAQGIPHTYVVANSFIGHYLPTWSDLGPITGLIDSTVILGDGKAKAVLNTEKDIATYTIRSVDDPRTLNKILYIKPPANIISYNDLVSLWEKKHSKNLKRVYVPEVQVLKYIEESSFPFNMAMSICHAAYVKGDHTNYEIEPSFGVEASELYPDIKYTTLEEFFNHNDSCTPFYLNRFILVNGVQNFY 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00429 327 Pfam NmrA-like family 6 237 IPR008030 -
Cca04g00429 327 Gene3D - 153 303 - -
Cca04g00429 327 PANTHER PINORESINOL REDUCTASE-RELATED 3 304 - -
Cca04g00429 327 Gene3D - 5 293 - -
Cca04g00429 327 CDD PCBER_SDR_a 5 302 IPR045312 GO:0016491
Cca04g00429 327 PANTHER PHENYLCOUMARAN BENZYLIC ETHER REDUCTASE 1 3 304 - -
Cca04g00429 327 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 269 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00429 Cca-Chr4 4254784 4257152 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00429 K23050 K13266 pvu:PHAVU_011G044500g 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00429 04 4254784 4257152 Cca04g00429 04 4254784 4257152 ECH