Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00428 ATGAGGATTTTGCTTCCTTCTCTTGCTCAGCCTGGTTTAGATGCTCCTCCAAGGGACAAGATCACCATATTTGGTGATGGCAACACAAAAGCTGTCTTCATGAAGGAAAGTGATGTTGCTGCCTTCACTATCAGTGCAGTTGATGACCCTCGTACGTTAAATAAAGTGTTGTATTTGAGGCCCCCAGGAAACCTTTGTTCTTTGAATGACCTGGTTAATATGTGGGAGATTAAGATCGGCAAGATGCTTGAGAAATTGCATGTCTCTGAAGAAGAGTTGCTCCAGAAAATCAAAGGAACATCTTTCCCTGCCAACTTCGAGATGCTCTTTATATATTATGCTTTCATAAAGGGAGATCACACATACTTTGATATTGAACCATCCTCTGGTGTGAATGGTACACAACTATATCCTCATCTGAAATATACCACAATCAGTGAATTCTTAGACACACTAGTTTAG 462 0.4048 MRILLPSLAQPGLDAPPRDKITIFGDGNTKAVFMKESDVAAFTISAVDDPRTLNKVLYLRPPGNLCSLNDLVNMWEIKIGKMLEKLHVSEEELLQKIKGTSFPANFEMLFIYYAFIKGDHTYFDIEPSSGVNGTQLYPHLKYTTISEFLDTLV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00428 153 Gene3D - 1 37 - -
Cca04g00428 153 Gene3D - 38 153 - -
Cca04g00428 153 PANTHER PINORESINOL-LARICIRESINOL REDUCTASE 3-RELATED 1 151 - -
Cca04g00428 153 Pfam NmrA-like family 1 82 IPR008030 -
Cca04g00428 153 PANTHER PINORESINOL REDUCTASE-RELATED 1 151 - -
Cca04g00428 153 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 124 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00428 Cca-Chr4 4252982 4254111 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00428 - - var:108339735 271.166